RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 F2RL1P55085 397 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 IRF3Q14653 427 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 MED22Q15528 200 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 RBM48Q5RL73 367 aaKnown RBP14.43□□□□□ -0.1
FXN-203ENST00000396366 ETV3LQ6ZN32 361 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 REC114Q7Z4M0 266 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 TGIF2LXQ8IUE1 241 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 MS4A15Q8N5U1 240 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 CHPT1Q8WUD6 406 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 FAAP24Q9BTP7 215 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 OR2S2Q9NQN1 319 aa14.43□□□□□ -0.1
FXN-203ENST00000396366 MBNL3Q9NUK0 354 aaKnown RBP14.43□□□□□ -0.1
FXN-203ENST00000396366 CA11O75493 328 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 MOSP00540 346 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 GLAP06280 429 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 SRMP19623 302 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 CD1BP29016 333 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 GPR12P47775 334 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 RPL23AP62750 156 aaKnown RBP14.42□□□□□ -0.1
FXN-203ENST00000396366 Q3ZCU0 254 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 MORN2Q502X0 79 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 C1orf100Q5SVJ3 147 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 LIPKQ5VXJ0 399 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 STPG2Q8N412 459 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 THRSPQ92748 146 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 TMEM203Q969S6 136 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 NICN1Q9BSH3 213 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 CST11Q9H112 138 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 SCN3BQ9NY72 215 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 GHRLQ9UBU3 117 aa14.42□□□□□ -0.1
FXN-203ENST00000396366 CHATP28329 748 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 HTR2CP28335 458 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 PPP1CCP36873 323 aaKnown RBP14.41□□□□□ -0.1
FXN-203ENST00000396366 ZNF137PP52743 207 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 KRTAP10-11P60412 298 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 RPS27AP62979 156 aaKnown RBP14.41□□□□□ -0.1
FXN-203ENST00000396366 SLC35A2P78381 396 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 UNC119Q13432 240 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 GLT8D1Q68CQ7 371 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 TRAT1Q6PIZ9 186 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 LCNL1Q6ZST4 164 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 C8orf86Q6ZUL3 223 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 OR2W3Q7Z3T1 314 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 C6orf201Q7Z4U5 140 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 FOXRED2Q8IWF2 684 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 MRPL41Q8IXM3 137 aaKnown RBP14.41□□□□□ -0.1
FXN-203ENST00000396366 LINC00482Q8N8I6 264 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 PHYHIPQ92561 330 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 RITA1Q96K30 269 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 S1PR3Q99500 378 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 ABCG5Q9H222 651 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 KCNIP1Q9NZI2 227 aa14.41□□□□□ -0.1
FXN-203ENST00000396366 HSD17B12Q53GQ0 312 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 TMEM91Q6ZNR0 172 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 ODF3L1Q8IXM7 274 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 DUX3Q96PT4 197 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 GFI1Q99684 422 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 HSPB9Q9BQS6 159 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 RAB9BQ9NP90 201 aa14.4□□□□□ -0.1
FXN-203ENST00000396366 LIN7CQ9NUP9 197 aaKnown RBP14.4□□□□□ -0.1
FXN-203ENST00000396366 A0A0A6YYD4 124 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 SLC22A1O15245 554 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 UCHL1P09936 223 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 UBBP0CG47 229 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 HSMCR30P0CW71 290 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 CD37P11049 281 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 THBS3P49746 956 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 RPS25P62851 125 aaKnown RBP14.39□□□□□ -0.11
FXN-203ENST00000396366 SLC35B1P78383 322 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 QRFPP83859 136 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 TMEM30BQ3MIR4 351 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 NEDD4LQ96PU5 975 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 RASL11BQ9BPW5 248 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 DUSP21Q9H596 190 aa14.39□□□□□ -0.11
FXN-203ENST00000396366 TMEM14DPA8MWL7 114 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 NUDT19A8MXV4 375 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 AP4M1O00189 453 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 LANCL1O43813 399 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 RPLP1P05386 114 aaKnown RBP14.38□□□□□ -0.11
FXN-203ENST00000396366 MYF6P23409 242 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 HOXD3P31249 432 aaPredicted RBP14.38□□□□□ -0.11
FXN-203ENST00000396366 OR3A3P47888 321 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 LSAMPQ13449 338 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 P2RY14Q15391 338 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 STEAP3Q658P3 488 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 FAM71E2Q8N5Q1 922 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 KLHL30-AS1Q8NEE0 82 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 KCNG3Q8TAE7 436 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 UFD1Q92890 307 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 RCC1LQ96I51 464 aaKnown RBP14.38□□□□□ -0.11
FXN-203ENST00000396366 ABHD14AQ9BUJ0 271 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 TM2D1Q9BX74 207 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 TMEM59Q9BXS4 323 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 TPRKBQ9Y3C4 175 aa14.38□□□□□ -0.11
FXN-203ENST00000396366 TXNL1O43396 289 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 CNTFRP26992 372 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 BLVRBP30043 206 aaPredicted RBP14.37□□□□□ -0.11
FXN-203ENST00000396366 MAP2K4P45985 399 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 HTD2P86397 168 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 TPBGQ13641 420 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms