RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 OR8G5Q8NG78 346 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 OR2I1PQ8NGU4 316 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 IL19Q9UHD0 177 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 PRNDQ9UKY0 176 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 TGIF2-C20orf24A0A0A6YYL0 155 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 IGHV3-43A0A0B4J1X8 118 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A10PA6NDY2 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A18PA6NE21 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A16PA6NEW6 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A20PA6NIJ5 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A8PA6NJQ4 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A7PA6NKC0 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A22PA8MWA6 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A12PA8MX19 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A5PA8MXJ8 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A23PA8MXZ1 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A15PP0C7V4 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A13PP0C7W8 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A14PP0C7W9 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A24PP0C7X0 464 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 IGHV3-43DP0DP04 118 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 RPS11P62280 158 aaKnown RBP eCLIP14.99□□□□□ -0.01
SIN3A-203ENST00000394949 BLNKQ8WV28 456 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 TCFL5Q9UL49 500 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 hADV38S2A0JD32 116 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 RBP4P02753 201 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 SMRP1Q8NCR6 262 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 MISP3Q96FF7 219 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 AMELYQ99218 206 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 GSN-AS1Q9NRJ2 163 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 TMEM38BQ9NVV0 291 aa14.99□□□□□ -0.01
SIN3A-203ENST00000394949 COL24A1Q17RW2 1714 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 DNASE2O00115 360 aaPredicted RBP14.98□□□□□ -0.01
SIN3A-203ENST00000394949 CORTO00230 105 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 SSMEM1Q8WWF3 244 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 PCGF1Q9BSM1 259 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 A0A0G2JK05 382 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 ZNF665Q9H7R5 613 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 RNF122Q9H9V4 155 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 ATG2BQ96BY7 2078 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 C21orf140B9A014 251 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 MDKP21741 143 aaPredicted RBP14.98□□□□□ -0.01
SIN3A-203ENST00000394949 S100A4P26447 101 aaKnown RBP14.98□□□□□ -0.01
SIN3A-203ENST00000394949 MRPS11P82912 194 aaKnown RBP14.98□□□□□ -0.01
SIN3A-203ENST00000394949 KCNMB2Q9Y691 235 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 M0QZ24 198 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 KLF4O43474 513 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 TRGC1P0CF51 173 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 PIPOXQ9P0Z9 390 aa14.98□□□□□ -0.01
SIN3A-203ENST00000394949 FOXS1O43638 330 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 MOSPD3O75425 235 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 PPP1CCP36873 323 aaKnown RBP14.97□□□□□ -0.01
SIN3A-203ENST00000394949 CT55Q8WUE5 264 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 DUSP15Q9H1R2 295 aaPredicted RBP14.97□□□□□ -0.01
SIN3A-203ENST00000394949 CDC42EP3Q9UKI2 254 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 MCM3APO60318 1980 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 TRBV23-1A0A0A0MS06 115 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 IFITM10A6NMD0 228 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 C9orf40Q8IXQ3 194 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 GNG10P50151 68 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 EFNB1P98172 346 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 LINC01590Q5TEZ4 76 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 SOSTQ9BQB4 213 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 OR2T8A6NH00 312 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 HLA-DQA1P01909 254 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 PRF1P14222 555 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 NPY1RP25929 384 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 CD1BP29016 333 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 FAM27BQ5VT28 67 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 MOB3BQ86TA1 216 aa14.97□□□□□ -0.01
SIN3A-203ENST00000394949 CDX2Q99626 313 aaPredicted RBP14.97□□□□□ -0.01
SIN3A-203ENST00000394949 ZNF785A8K8V0 405 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 FAM90A26D6RGX4 464 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 Q56UQ5 140 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 C12orf54Q6X4T0 127 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 RSG1Q9BU20 258 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 ZNF729A6NN14 1252 aaPredicted RBP14.96□□□□□ -0.01
SIN3A-203ENST00000394949 CSN3P07498 182 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 G6PCP35575 357 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 OR2M3Q8NG83 312 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 ZNF721Q8TF20 911 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 M0R296 226 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 HBZP02008 142 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 PRSS1P07477 247 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 COL8A1P27658 744 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 GAB4Q2WGN9 574 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 HIKESHIQ53FT3 197 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 SPNS3Q6ZMD2 512 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 PERPQ96FX8 193 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 TUBA4BQ9H853 241 aa14.96□□□□□ -0.01
SIN3A-203ENST00000394949 PTPRFP10586 1907 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 CCL2P13500 99 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 PRSS12P56730 875 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 ALKBH6Q3KRA9 238 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 SLC23A3Q6PIS1 610 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 TMEM183AQ8IXX5 376 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 KCNK17Q96T54 332 aa14.96□□□□□ -0.02
SIN3A-203ENST00000394949 EML2O95834 649 aa14.95□□□□□ -0.02
SIN3A-203ENST00000394949 KLF3P57682 345 aaPredicted RBP14.95□□□□□ -0.02
SIN3A-203ENST00000394949 TAF15Q92804 592 aaKnown RBP eCLIP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms