RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 IL17BQ9UHF5 180 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 VEGFBP49765 207 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 OR5I1Q13606 314 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 STPG1Q5TH74 334 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 Q6ZN92 141 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 RCC1LQ96I51 464 aaKnown RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 C14orf144Q96I85 54 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 RBM14Q96PK6 669 aaKnown RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 TP53RKQ96S44 253 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 AGMATQ9BSE5 352 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 FAM103A1Q9BTL3 118 aaKnown RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 WDR61Q9GZS3 305 aaKnown RBP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 A0A0A6YYD4 124 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 J3QT63 122 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 SIRPB1O00241 398 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 CEACAM6P40199 344 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 SUB1P53999 127 aaKnown RBP eCLIP7.45□□□□□ -1.22
GABRA1-202ENST00000393943 UBE2G2P60604 165 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 ID3Q02535 119 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 TET1Q8NFU7 2136 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 OR4X1Q8NH49 305 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 SGMS2Q8NHU3 365 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 WIPI2Q9Y4P8 454 aa7.45□□□□□ -1.22
GABRA1-202ENST00000393943 KIF26BQ2KJY2 2108 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 RNF224P0DH78 156 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 BPIFB3P59826 476 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
GABRA1-202ENST00000393943 IL11RAQ14626 422 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 GPR146Q96CH1 333 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 SLC35E1Q96K37 410 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 HSD17B10Q99714 261 aaKnown RBP7.44□□□□□ -1.22
GABRA1-202ENST00000393943 RSG1Q9BU20 258 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 PARLQ9H300 379 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 MDC1Q14676 2089 aaKnown RBP7.44□□□□□ -1.22
GABRA1-202ENST00000393943 TP53BP1Q12888 1972 aaPredicted RBP7.44□□□□□ -1.22
GABRA1-202ENST00000393943 IGHV3-15A0A0B4J1V0 119 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 COX5BP10606 129 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 PSG2P11465 335 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 NTF3P20783 257 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 CD82P27701 267 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 CEACAM21Q3KPI0 293 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 DMRTC1Q5HYR2 192 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 LYSMD4Q5XG99 296 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 TMEM92Q6UXU6 159 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 ZNF738Q8NE65 137 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 MRGPRFQ96AM1 343 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 TMEM68Q96MH6 324 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 TRIB1Q96RU8 372 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 PRDM14Q9GZV8 571 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 RBKSQ9H477 322 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 LOC101059948A0A1B0GTJ6 334 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 A0A1W2PPE3 182 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 PMS2P1A4D2B8 440 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 IRF2P14316 349 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 S100A7P31151 101 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 NXPH1P58417 271 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 UBE2G1P62253 170 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 COL10A1Q03692 680 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 HERPUD1Q15011 391 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 SMIM21Q3B7S5 101 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 R3HDM4Q96D70 268 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 S1PR3Q99500 378 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 IER2Q9BTL4 223 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 WDR54Q9H977 334 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 OR6C3Q9NZP0 311 aa7.44□□□□□ -1.22
GABRA1-202ENST00000393943 IGLV3-32A0A0A0MS00 114 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 KIAA1324LA8MWY0 1029 aaPredicted RBP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 LINC00614P0C842 121 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 BCL3P20749 454 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 PLAURQ03405 335 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 TRA2AQ13595 282 aaKnown RBP eCLIP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 YRDCQ86U90 279 aaKnown RBP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 OR1L6Q8NGR2 347 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 OR5B3Q8NH48 314 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 WFDC1Q9HC57 220 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 NGFP01138 241 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 HLA-DQA1P01909 254 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 IGHV4-34P06331 123 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 RNPS1Q15287 305 aaKnown RBP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 FAM131CQ96AQ9 280 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 WDYHV1Q96HA8 205 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 PARD6GQ9BYG4 376 aaPredicted RBP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 PKIBQ9C010 78 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 OOEPA6NGQ2 149 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 DIRC3C9JPN6 131 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 J3QR89 54 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 NRG2O14511 850 aaPredicted RBP7.43□□□□□ -1.22
GABRA1-202ENST00000393943 ZNF253O75346 499 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 FGF5P12034 268 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 LIFP15018 202 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 IL15RAQ13261 267 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 NRN1LQ496H8 165 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 F5P12259 2224 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 SLC22A20A6NK97 555 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 PMCHP20382 165 aa7.43□□□□□ -1.22
GABRA1-202ENST00000393943 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms