RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 HNF4GQ14541 408 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 PLAC9Q5JTB6 97 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 C6orf183Q5T699 404 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 FAM89BQ8N5H3 189 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 KLHDC1Q8N7A1 406 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF439Q8NDP4 499 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR10A7Q8NGE5 316 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 CAPSLQ8WWF8 208 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 URM1Q9BTM9 101 aaKnown RBP6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 CENPOQ9BU64 300 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 PECRQ9BY49 303 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 NPFFR1Q9GZQ6 430 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 LIN7BQ9HAP6 207 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB18Q9NP72 206 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR2S2Q9NQN1 319 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 MBNL3Q9NUK0 354 aaKnown RBP6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 PLEKHJ1Q9NW61 149 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 AMMECR1Q9Y4X0 333 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 A0A1B0GUS0 222 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF736B4DX44 427 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 CA11O75493 328 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 NAPSAO96009 420 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 GLAP06280 429 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 SNRPBP14678 240 aaKnown RBP6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 GNB3P16520 340 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 FGF9P31371 208 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 BRS3P32247 399 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 SDC2P34741 201 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 MNDAP41218 407 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 KIR2DS4P43632 304 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 HES1Q14469 280 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 HMGN3Q15651 99 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 CT45A1Q5HYN5 189 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 MOB3BQ86TA1 216 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 LYG1Q8N1E2 194 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 TSPAN14Q8NG11 270 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR52M1Q8NGK5 317 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR2T6Q8NHC8 308 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 CT45A3Q8NHU0 189 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 IL1F10Q8WWZ1 152 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 MAFIPQ8WZ33 124 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 CFHR4Q92496 578 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 CITED1Q99966 193 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 SLC25A33Q9BSK2 321 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 PARP12Q9H0J9 701 aaKnown RBP6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 SERTAD4Q9NUC0 356 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 KCNIP1Q9NZI2 227 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 FBLN5Q9UBX5 448 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 DAPK2Q9UIK4 370 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 PITPNC1Q9UKF7 332 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 ELF5Q9UKW6 265 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 SSR3Q9UNL2 185 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 KCNK7Q9Y2U2 307 aa6.13□□□□□ -1.43
HMGB3P1-201ENST00000393368 IGHV1-3A0A0C4DH29 117 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 TNFAIP8O95379 198 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 IGKV1D-33P01593 117 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 IGKV1-33P01594 117 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 AMY1AP04745 511 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 AMY2AP04746 511 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 GALP22466 123 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 PSMD7P51665 324 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 ARHGDIBP52566 201 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 LSM3P62310 102 aaKnown RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 ABCA11PQ4W5N1 156 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 MORN2Q502X0 79 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 ARSJQ5FYB0 599 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 C9orf152Q5JTZ5 239 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 CCDC144NLQ6NUI1 221 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 SFXN4Q6P4A7 337 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF880Q6PDB4 577 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 TRAT1Q6PIZ9 186 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 SLC25A48Q6ZT89 311 aaKnown RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 Q6ZTK2 550 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 LINC00311Q8N616 119 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR56B1Q8NGI3 324 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 LGALS14Q8TCE9 139 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 RTN4IP1Q8WWV3 396 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 CREB3L1Q96BA8 519 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 KCTD7Q96MP8 289 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 RBM14Q96PK6 669 aaKnown RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 OCSTAMPQ9BR26 566 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 ABHD14AQ9BUJ0 271 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 RANBP3Q9H6Z4 567 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR1A1Q9P1Q5 309 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF230Q9UIE0 474 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 JPT1Q9UK76 154 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB22AQ9UL26 194 aa6.12□□□□□ -1.43
HMGB3P1-201ENST00000393368 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 A0A087WXM4 84 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 IGKV1-6A0A0C4DH72 117 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 FAM90A9PA6NNJ1 464 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 NOTOA8MTQ0 251 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 OOSP1A8MZH6 123 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 H3BUI4 141 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB27BO00194 218 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR2F2O95006 317 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 TSPAN15O95858 294 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 GAPDHP04406 335 aaKnown RBP6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 LPLP06858 475 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms