RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 BMI1P35226 326 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 CDKN1BP46527 198 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 COL5A1-AS1Q5SY13 56 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 CFAP161Q6P656 301 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 C6orf15Q6UXA7 325 aaPredicted RBP10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 TUSC5Q8IXB3 177 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 C10orf35Q96D05 121 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 RAB39BQ96DA2 213 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 NAA60Q9H7X0 242 aa10.05□□□□□ -0.8
RAPGEF3-201ENST00000389212 NDUFS8O00217 210 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 MRPL33O75394 65 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 GPM6AP51674 278 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ERVFRD-1P60508 538 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 MRPL49Q13405 166 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 TMEM187Q14656 261 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ARL6IP1Q15041 203 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 OR2J1Q9GZK6 312 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 FGF23Q9GZV9 251 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 C5orf49A4QMS7 147 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 BCL3P20749 454 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 RPL19P84098 196 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 MALLQ13021 153 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 FAM213BQ8TBF2 198 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 PRRG4Q9BZD6 226 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 LNP1A1A4G5 178 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 H0YL77 283 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 CD5P06127 495 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 PMELP40967 661 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 LDLRAD2Q5SZI1 272 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 TMEM42Q69YG0 159 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ZNF573Q86YE8 665 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 OR5T1Q8NG75 326 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ABHD5Q8WTS1 349 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ZNF488Q96MN9 340 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 SLC35B3Q9H1N7 401 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 IL19Q9UHD0 177 aa10.04□□□□□ -0.8
RAPGEF3-201ENST00000389212 ZNF816-ZNF321PA0A0X1KG74 233 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 DVL1O14640 695 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 NGFP01138 241 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 CEACAM1P13688 526 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 EPHA1P21709 976 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 MAGEA5P43359 124 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 FUT6P51993 359 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 GFRA1P56159 465 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 RBM11P57052 281 aaKnown RBP10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 SPIN3Q5JUX0 258 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 C1orf210Q8IVY1 113 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 SAT2Q96F10 170 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 GUCD1Q96NT3 240 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 TBX15Q96SF7 602 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 SH3BGRL3Q9H299 93 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 ZNF286AQ9HBT8 521 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 PITPNC1Q9UKF7 332 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 TMEM265A0A087WTH1 108 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 IGHV3-64DA0A0J9YX35 117 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 CCL25O15444 150 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 PDCD6O75340 191 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 HPRT1P00492 218 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 DLK1P80370 383 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 EIF3IQ13347 325 aaKnown RBP10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 ZNF66Q6ZN08 573 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 CORO2AQ92828 525 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 RARRES2Q99969 163 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 FKBP11Q9NYL4 201 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 PRR14LQ5THK1 2151 aa10.03□□□□□ -0.8
RAPGEF3-201ENST00000389212 H3BQ15 152 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 MMP9P14780 707 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 HERV-K104P61576 105 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 TMEM268Q5VZI3 342 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 MALSU1Q96EH3 234 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 ARRDC1-AS1Q9H2J1 176 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 SELENOKQ9Y6D0 94 aa10.02□□□□□ -0.8
RAPGEF3-201ENST00000389212 SERPINA7P05543 415 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 SCTP09683 121 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 OMGP23515 440 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 DTYMKP23919 212 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 BRS3P32247 399 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 FBXW12Q6X9E4 464 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 SMIM8Q96KF7 97 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 MAGT1Q9H0U3 335 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 TUBD1Q9UJT1 453 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 DIDO1Q9BTC0 2240 aaKnown RBP10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 A0A1W2PNU3 283 aaPredicted RBP10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 C9orf172C9J069 976 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 DNPH1O43598 174 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 LILRA1O75019 489 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 NEURL1O76050 574 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 IL18BPO95998 194 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 CST4P01036 141 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 PRDX4Q13162 271 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 OR8B8Q15620 311 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 FBXW9Q5XUX1 488 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 C1QL4Q86Z23 238 aa10.02□□□□□ -0.81
RAPGEF3-201ENST00000389212 C1orf87Q8N0U7 546 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms