RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 LINC00527Q9UJ94 153 aa2.69□□□□□ -1.98
RNU6-40P-201ENST00000384254 PUS1Q9Y606 427 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-40P-201ENST00000384254 PTPRKQ15262 1439 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 E7EQL1 145 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 CCRL2O00421 344 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 TP53I11O14683 189 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 ZW10O43264 779 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 STX10O60499 249 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 GRPRP30550 384 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 TRMT12Q53H54 448 aaKnown RBP2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 WDR59Q6PJI9 974 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 SCGB1D4Q6XE38 83 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 FUNDC1Q8IVP5 155 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 C2orf73Q8N5S3 287 aaPredicted RBP2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 Q8NAQ8 132 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 MFSD8Q8NHS3 518 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 CYGBQ8WWM9 190 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 RAD51AP1Q96B01 352 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 MED18Q9BUE0 208 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 ZNF426Q9BUY5 554 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 C11orf49Q9H6J7 331 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 UBQLN4Q9NRR5 601 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 EURLQ9NYK6 297 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 VPREB3Q9UKI3 123 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 LINC00588Q9Y4M8 146 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 SNX10Q9Y5X0 201 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 MYO5BQ9ULV0 1848 aa2.68□□□□□ -1.98
RNU6-40P-201ENST00000384254 EIF4G1Q04637 1599 aaKnown RBP2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 C1orf232A0A0U1RR37 186 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 METTL15A6NJ78 407 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 LECT2O14960 151 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 OR4A8P0C604 315 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 PPP1CCP36873 323 aaKnown RBP2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 PSMB3P49720 205 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 HES3Q5TGS1 186 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 HCP5Q6MZN7 132 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 NATD1Q8N6N6 113 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 OR8K1Q8NGG5 319 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 OR51H1Q8NH63 302 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 TNFAIP8L1Q8WVP5 186 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 EIF5A2Q9GZV4 153 aaKnown RBP2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 DRC3Q9H069 523 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 MRPL16Q9NX20 251 aaKnown RBP2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 PSMD13Q9UNM6 376 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 ZSWIM8A7E2V4 1837 aa2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 DNMT1P26358 1616 aaKnown RBP2.67□□□□□ -1.98
RNU6-40P-201ENST00000384254 NACADO15069 1562 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 STK16O75716 305 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 HBZP02008 142 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 CTSGP08311 255 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 ORM2P19652 201 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 GZMMP51124 257 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 DAD1P61803 113 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 DEFA6Q01524 100 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 OR8G1Q15617 311 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 PLCZ1Q86YW0 608 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 DNAJC12Q9UKB3 198 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 ALG5Q9Y673 324 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 RAD50Q92878 1312 aa2.66□□□□□ -1.98
RNU6-40P-201ENST00000384254 IGLV10-54A0A075B6I4 117 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 A8MWP6 167 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 ITGB1BP1O14713 200 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 ATP8B1O43520 1251 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 HPGDSO60760 199 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 HIST1H1CP16403 213 aaKnown RBP2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 ACTBP60709 375 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 ACTG1P63261 375 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 SMAGPQ0VAQ4 97 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 TBC1D28Q2M2D7 210 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 HLA-DRB5Q30154 266 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 SPIN4Q56A73 249 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 DNAJB3Q8WWF6 145 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 LRRC19Q9H756 370 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 FAM206AQ9NX38 181 aa2.65□□□□□ -1.99
RNU6-40P-201ENST00000384254 A0A0A6YYH2 397 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 IGKV1-12A0A0C4DH73 117 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 A6NJ64 397 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 ADAP1O75689 374 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 IGKV1D-12P01611 117 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 LINC00614P0C842 121 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 NQO1P15559 274 aaKnown RBP2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 ZNF22P17026 224 aaPredicted RBP2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 SLC35A2P78381 396 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 MEF2BQ02080 365 aaPredicted RBP2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 BSPH1Q075Z2 132 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 DRAM2Q6UX65 266 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 TCF24Q7RTU0 167 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 CD302Q8IX05 232 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 MSRB3Q8IXL7 192 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 GPR119Q8TDV5 335 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 LMX1AQ8TE12 382 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 ABHD14BQ96IU4 210 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 TAS2R9Q9NYW1 312 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 CLUHO75153 1309 aa2.64□□□□□ -1.99
RNU6-40P-201ENST00000384254 G3V3Q6 166 aa2.63□□□□□ -1.99
RNU6-40P-201ENST00000384254 COPEO14579 308 aa2.63□□□□□ -1.99
RNU6-40P-201ENST00000384254 CRTAPO75718 401 aaPredicted RBP2.63□□□□□ -1.99
RNU6-40P-201ENST00000384254 LGALS3P17931 250 aaKnown RBP2.63□□□□□ -1.99
RNU6-40P-201ENST00000384254 COTL1Q14019 142 aa2.63□□□□□ -1.99
RNU6-40P-201ENST00000384254 DNM1P34Q6PK57 102 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms