RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 LOC100130705A0A1B0GUX0 176 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 OVOL1O14753 267 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 LANCL1O43813 399 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 SAP30O75446 220 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 ETV1P50549 477 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 GABPB1Q06547 395 aaPredicted RBP17.97■□□□□ 0.47
U2AF1-202ENST00000380276 DCUN1D4Q92564 292 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 OR2S2Q9NQN1 319 aa17.97■□□□□ 0.47
U2AF1-202ENST00000380276 MAGEA13PA6NCF6 341 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 H3BNX3 289 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 I3L521 148 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 RCC1P18754 421 aaPredicted RBP17.96■□□□□ 0.47
U2AF1-202ENST00000380276 CNTFRP26992 372 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 VHLP40337 213 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 ACTBP60709 375 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 ADARB1P78563 741 aaKnown RBP17.96■□□□□ 0.47
U2AF1-202ENST00000380276 ASPHD1Q5U4P2 390 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 TRAT1Q6PIZ9 186 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 GLIPR1L1Q6UWM5 242 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 ZNF429Q86V71 674 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 SBSPONQ8IVN8 264 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 CHCHD6Q9BRQ6 235 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 C9orf16Q9BUW7 83 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 OR51J1Q9H342 316 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 BANF2Q9H503 90 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 MRPS18AQ9NVS2 196 aaKnown RBP17.96■□□□□ 0.47
U2AF1-202ENST00000380276 KCNIP1Q9NZI2 227 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 ZNF580Q9UK33 172 aa17.96■□□□□ 0.47
U2AF1-202ENST00000380276 TRAV41A0A0B4J266 112 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 UBE2QL1A1L167 161 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 PPIFP30405 207 aaKnown RBP17.95■□□□□ 0.46
U2AF1-202ENST00000380276 GNMTQ14749 295 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 SMN1Q16637 294 aaKnown RBP17.95■□□□□ 0.46
U2AF1-202ENST00000380276 ECSCRQ19T08 205 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 CASC10Q5T4H9 136 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 AWAT2Q6E213 333 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 ZFP1Q6P2D0 407 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 OR52L2PQ8NGH6 319 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 MYOZ3Q8TDC0 251 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 APH1BQ8WW43 257 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 SMIM19Q96E16 107 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 ABHD14AQ9BUJ0 271 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 MRPL20Q9BYC9 149 aaKnown RBP17.95■□□□□ 0.46
U2AF1-202ENST00000380276 TAF9BQ9HBM6 251 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 PALMDQ9NP74 551 aa17.95■□□□□ 0.46
U2AF1-202ENST00000380276 FGF20Q9NP95 211 aaPredicted RBP17.95■□□□□ 0.46
U2AF1-202ENST00000380276 RCC2Q9P258 522 aaKnown RBP17.95■□□□□ 0.46
U2AF1-202ENST00000380276 BLVRBP30043 206 aaPredicted RBP17.94■□□□□ 0.46
U2AF1-202ENST00000380276 MORN2Q502X0 79 aa17.94■□□□□ 0.46
U2AF1-202ENST00000380276 ANKRD60Q9BZ19 345 aa17.94■□□□□ 0.46
U2AF1-202ENST00000380276 SELENOIQ9C0D9 397 aa17.94■□□□□ 0.46
U2AF1-202ENST00000380276 ALX4Q9H161 411 aaPredicted RBP17.94■□□□□ 0.46
U2AF1-202ENST00000380276 KIAA1456Q9P272 454 aa17.94■□□□□ 0.46
U2AF1-202ENST00000380276 TRAV8-7A0A075B6U6 113 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 IGHV7-81A0A0B4J1V7 117 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 A0A1W2PPK0 400 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 NBR2O15453 112 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 SPNP16150 400 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 IGFBP3P17936 291 aaPredicted RBP17.93■□□□□ 0.46
U2AF1-202ENST00000380276 MYL12AP19105 171 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 PPP1CCP36873 323 aaKnown RBP17.93■□□□□ 0.46
U2AF1-202ENST00000380276 RAB9AP51151 201 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 SLURP1P55000 103 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 RUNX1Q01196 453 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 ZFP41Q8N8Y5 198 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 ABHD5Q8WTS1 349 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 GHSRQ92847 366 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 RITA1Q96K30 269 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 ZMAT4Q9H898 229 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 CHCHD3Q9NX63 227 aaKnown RBP17.93■□□□□ 0.46
U2AF1-202ENST00000380276 BABAM2Q9NXR7 383 aa17.93■□□□□ 0.46
U2AF1-202ENST00000380276 A0A1W2PN81 502 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 CRTAPO75718 401 aaPredicted RBP17.92■□□□□ 0.46
U2AF1-202ENST00000380276 HLA-DRB1P01911 266 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 CHRNA7P36544 502 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 KIAA0141Q14154 515 aaPredicted RBP17.92■□□□□ 0.46
U2AF1-202ENST00000380276 Q499Y3 187 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 LIN54Q6MZP7 749 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 C5orf24Q7Z6I8 188 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 ZNF555Q8NEP9 628 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 MRPS24Q96EL2 167 aaKnown RBP17.92■□□□□ 0.46
U2AF1-202ENST00000380276 SLC29A1Q99808 456 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 NABP2Q9BQ15 211 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 ERGIC3Q9Y282 383 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 A3GALT2U3KPV4 340 aa17.92■□□□□ 0.46
U2AF1-202ENST00000380276 TRBV5-5A0A0J9YX44 114 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 OGG1O15527 345 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 IGLV1-40P01703 118 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 MAS1P04201 325 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 FRMD6-AS1P0C7T7 363 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 MGMTP16455 207 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 DCKP27707 260 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 C5orf64Q2M2E5 130 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 STEAP3Q658P3 488 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 CASTOR1Q8WTX7 329 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 DLX4Q92988 240 aaPredicted RBP17.91■□□□□ 0.46
U2AF1-202ENST00000380276 GHITMQ9H3K2 345 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 JPT1Q9UK76 154 aa17.91■□□□□ 0.46
U2AF1-202ENST00000380276 PNMA8CA0A1B0GUJ8 204 aa17.9■□□□□ 0.46
U2AF1-202ENST00000380276 LINC01619G3V211 115 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms