RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TMEM11P17152 192 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 KRTAP10-3P60369 221 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 BLCAPP62952 87 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 UTF1Q5T230 341 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 DRAM1Q8N682 238 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 OR56B4Q8NH76 319 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 OR1L1Q8NH94 360 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 SETD6Q8TBK2 473 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 NICN1Q9BSH3 213 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 LPAR5Q9H1C0 372 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 MMP27Q9H306 513 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 MOB4Q9Y3A3 225 aa17.7■□□□□ 0.42
SRM-201ENST00000376957 FAM90A9PA6NNJ1 464 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 SNRNP70P08621 437 aaKnown RBP17.69■□□□□ 0.42
SRM-201ENST00000376957 HES5Q5TA89 166 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 C22orf42Q6IC83 251 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 SLC25A48Q6ZT89 311 aaKnown RBP17.69■□□□□ 0.42
SRM-201ENST00000376957 FAM89BQ8N5H3 189 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 OR10V1Q8NGI7 309 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 GFI1Q99684 422 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 STUB1Q9UNE7 303 aa17.69■□□□□ 0.42
SRM-201ENST00000376957 IGHV1-3A0A0C4DH29 117 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 A0A1W2PPI3 338 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 METTL21EPA6NDL7 271 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 IFITM5A6NNB3 132 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 CSF1P09603 554 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 GADD45AP24522 165 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 FGF9P31371 208 aaPredicted RBP17.68■□□□□ 0.42
SRM-201ENST00000376957 VEGFCP49767 419 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 CLDN12P56749 244 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 ABCA11PQ4W5N1 156 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 MORN2Q502X0 79 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 TPRA1Q86W33 373 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 TGIF2LXQ8IUE1 241 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 KCNK15Q9H427 330 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 VCX3AQ9NNX9 186 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 SERTAD4Q9NUC0 356 aa17.68■□□□□ 0.42
SRM-201ENST00000376957 YPEL1O60688 119 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 FBXO24O75426 580 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 IGKV1D-33P01593 117 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 IGKV1-33P01594 117 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 HABP2Q14520 560 aaPredicted RBP17.67■□□□□ 0.42
SRM-201ENST00000376957 KCTD21Q4G0X4 260 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 CENPVQ7Z7K6 275 aaPredicted RBP17.67■□□□□ 0.42
SRM-201ENST00000376957 OR2T10Q8NGZ9 312 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 RTN4IP1Q8WWV3 396 aaPredicted RBP17.67■□□□□ 0.42
SRM-201ENST00000376957 IL1F10Q8WWZ1 152 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 YPEL2Q96QA6 119 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 C12orf4Q9NQ89 552 aa17.67■□□□□ 0.42
SRM-201ENST00000376957 TET2Q6N021 2002 aaPredicted RBP17.66■□□□□ 0.42
SRM-201ENST00000376957 SOCS1O15524 211 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 NAPSAO96009 420 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 CD1BP29016 333 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 REG1BP48304 166 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 HMGN3Q15651 99 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 C9orf152Q5JTZ5 239 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 LYG1Q8N1E2 194 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 OR2AK2Q8NG84 335 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 CFHR4Q92496 578 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 ABHD14AQ9BUJ0 271 aa17.66■□□□□ 0.42
SRM-201ENST00000376957 TRBV6-6A0A0A6YYG2 114 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 FGF16O43320 207 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 RAB6AP20340 208 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 ZNF137PP52743 207 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 DIAPH2-AS1Q14236 149 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 ARL6IP1Q15041 203 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 CT45A1Q5HYN5 189 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 LY6G6FQ5SQ64 297 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 OR52L2PQ8NGH6 319 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 CT45A3Q8NHU0 189 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 PTX4Q96A99 478 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 RAB3CQ96E17 227 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 CMSS1Q9BQ75 279 aaKnown RBP17.65■□□□□ 0.42
SRM-201ENST00000376957 CENPOQ9BU64 300 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 GHITMQ9H3K2 345 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 TXNL4BQ9NX01 149 aaKnown RBP17.65■□□□□ 0.42
SRM-201ENST00000376957 AK3Q9UIJ7 227 aa17.65■□□□□ 0.42
SRM-201ENST00000376957 TMEM272A0A1B0GTI8 110 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 CD3GP09693 182 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 ZBTB25P24278 435 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 HNF4GQ14541 408 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 IZUMO1Q8IYV9 350 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 C11orf44Q8N8P7 122 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 ZNF439Q8NDP4 499 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 ST6GALNAC6Q969X2 333 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 ARHGAP5-AS1Q96IT6 56 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 KCTD7Q96MP8 289 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 PECRQ9BY49 303 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 WNT10AQ9GZT5 417 aa17.64■□□□□ 0.41
SRM-201ENST00000376957 A0A0A6YYD4 124 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 NCBP2LA6PVI3 153 aaKnown RBP17.63■□□□□ 0.41
SRM-201ENST00000376957 NOTOA8MTQ0 251 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 HSPA12AO43301 675 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 LANCL1O43813 399 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 MOSP00540 346 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 PPP1CCP36873 323 aaKnown RBP17.63■□□□□ 0.41
SRM-201ENST00000376957 ZNF134P52741 427 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 OR10A3P58181 314 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 EBI3Q14213 229 aa17.63■□□□□ 0.41
SRM-201ENST00000376957 NEDD8Q15843 81 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms