RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SLC22A18ASQ8N1D0 253 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 MRPL30Q8TCC3 161 aaKnown RBP19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF831Q5JPB2 1677 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 IGHV3-72A0A0B4J1Y9 119 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 CTXND1A0A1B0GTU2 59 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 CA11O75493 328 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 LOXL3P58215 753 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 MESP2Q0VG99 397 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 GPR6P46095 362 aaPredicted RBP19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 SRSF9Q13242 221 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■□□□□ 8.7
TM9SF3-201ENST00000371142 IGSF11Q5DX21 431 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 MYOZ3Q8TDC0 251 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 MS4A7Q9GZW8 240 aaPredicted RBP19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 M0R143 59 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 CDK2AP1O14519 115 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 RAB29O14966 203 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 RPL24P83731 157 aaKnown RBP19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 HOXA4Q00056 320 aaPredicted RBP19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 GABRA6Q16445 453 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 COL18A1P39060 1754 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 K7N7A8 449 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 FAM216AQ8WUB2 273 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF714Q96N38 554 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 PAXXQ9BUH6 204 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 IGHV1-45A0A0A0MS14 117 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF250P15622 560 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 GGTLC2Q14390 218 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 SPANXN1Q5VSR9 72 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF207O43670 478 aaKnown RBP19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 PITX3O75364 302 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ISLRO14498 428 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ID1P41134 155 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 TFPI2P48307 235 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 FAM74A3Q4VXF1 159 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 SMIM12Q96EX1 92 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ABHD14BQ96IU4 210 aa19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF552Q9H707 407 aaPredicted RBP19.24■□□□□ 0.67
TM9SF3-201ENST00000371142 UCP2P55851 309 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 TMEM251Q8N6I4 163 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 ABCA3Q99758 1704 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 H3BVH4 76 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 ZFP36L2P47974 494 aaKnown RBP19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 SULT1A2P50226 295 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 PARP11Q9NR21 331 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 LOC102724200A0A096LPH7 203 aaPredicted RBP19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 ASAH2BP0C7U1 165 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 DLX1P56177 255 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 CLDN18P56856 261 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 SCN3AQ9NY46 2000 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 OR4C46A6NHA9 309 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 HIST1H1BP16401 226 aaKnown RBP19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 CEACAM21Q3KPI0 293 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 OR2V2Q96R30 315 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 HSPB8Q9UJY1 196 aa19.23■□□□□ 0.67
TM9SF3-201ENST00000371142 A0A087X0M5 115 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 A0A1B0GX30 115 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 PRF1P14222 555 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 COX19Q49B96 90 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 STXBP6Q8NFX7 210 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 MS4A3Q96HJ5 214 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 IL17BQ9UHF5 180 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 ZP4Q12836 540 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 CCDC144NLQ6NUI1 221 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 PRSS27Q9BQR3 290 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 A0A1W2PPC1 479 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 HPRT1P00492 218 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 RUNX1Q01196 453 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 MUC15Q8N387 334 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 IGKV1-8A0A0C4DH67 115 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 HBZP02008 142 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 TWIST1Q15672 202 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 FAM27BQ5VT28 67 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 PMS2CLQ68D20 193 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 STPG2Q8N412 459 aa19.22■□□□□ 0.67
TM9SF3-201ENST00000371142 NPIPB8E9PQR5 432 aa19.21■□□□□ 0.67
TM9SF3-201ENST00000371142 GHITMQ9H3K2 345 aa19.21■□□□□ 0.67
TM9SF3-201ENST00000371142 F5P12259 2224 aa19.21■□□□□ 0.67
TM9SF3-201ENST00000371142 ROM1Q03395 351 aa19.21■□□□□ 0.66
TM9SF3-201ENST00000371142 SIRT7Q9NRC8 400 aa19.21■□□□□ 0.66
TM9SF3-201ENST00000371142 KCNK7Q9Y2U2 307 aa19.21■□□□□ 0.66
TM9SF3-201ENST00000371142 SUCLG1P53597 346 aaKnown RBP19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 ERVFRD-1P60508 538 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 C19orf57Q0VDD7 668 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 F12P00748 615 aaPredicted RBP19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 CEBPDP49716 269 aaPredicted RBP19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 TNFSF18Q9UNG2 199 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 TRPM6Q9BX84 2022 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 A0A1W2PP11 408 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 HYPMO75409 117 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 VN1R17PQ8TDU5 208 aa19.2■□□□□ 0.66
TM9SF3-201ENST00000371142 DHRS7CA6NNS2 312 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 DXOO77932 396 aaKnown RBP19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 ZNF383Q8NA42 475 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 BRWD1Q9NSI6 2320 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 NKX2-8O15522 239 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 SEC11BP0C7V7 166 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 MMP9P14780 707 aa19.19■□□□□ 0.66
TM9SF3-201ENST00000371142 MDKP21741 143 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms