RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 OR2AK2Q8NG84 335 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 OR5T2Q8NGG2 359 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 PLPPR1Q8TBJ4 325 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 MRPL30Q8TCC3 161 aaKnown RBP8.26□□□□□ -1.09
TPM3-210ENST00000368530 TOMM40LQ969M1 308 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 TMEM230Q96A57 120 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 WDR89Q96FK6 387 aaPredicted RBP8.26□□□□□ -1.09
TPM3-210ENST00000368530 ZNF486Q96H40 463 aaPredicted RBP8.26□□□□□ -1.09
TPM3-210ENST00000368530 MEGF10Q96KG7 1140 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 ALX4Q9H161 411 aaPredicted RBP8.26□□□□□ -1.09
TPM3-210ENST00000368530 C5orf66Q9H5L9 145 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 HES4Q9HCC6 221 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 GPR132Q9UNW8 380 aa8.26□□□□□ -1.09
TPM3-210ENST00000368530 IGHV3OR15-7A0A075B7D8 119 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 A0A1B0GWJ7 208 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 C9orf170A2RU37 121 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 C17orf100A8MU93 164 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 BET1O15155 118 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 TPD52L2O43399 206 aaKnown RBP8.25□□□□□ -1.09
TPM3-210ENST00000368530 NOS1APO75052 506 aaPredicted RBP8.25□□□□□ -1.09
TPM3-210ENST00000368530 KNG1P01042 644 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 FSHBP01225 129 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 IGHV1-46P01743 117 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 NFYAP23511 347 aaPredicted RBP8.25□□□□□ -1.09
TPM3-210ENST00000368530 FCGR2CP31995 323 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 TAS2R31P59538 309 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 ZNF146Q15072 292 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 SLC9A3R2Q15599 337 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 SPIN3Q5JUX0 258 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 DCAF12L2Q5VW00 463 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 SPICQ8N5J4 248 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 SCGB3A2Q96PL1 93 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 RTBDNQ9BSG5 229 aaPredicted RBP8.25□□□□□ -1.09
TPM3-210ENST00000368530 FXYD6Q9H0Q3 95 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 ZNF665Q9H7R5 613 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 IFT22Q9H7X7 185 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 PLSCR3Q9NRY6 295 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 SLC23A1Q9UHI7 598 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 OPN4Q9UHM6 478 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 GLS2Q9UI32 602 aa8.25□□□□□ -1.09
TPM3-210ENST00000368530 C14orf166Q9Y224 244 aaKnown RBP8.25□□□□□ -1.09
TPM3-210ENST00000368530 RFPL4AA6NLU0 287 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 RFPL4AL1F8VTS6 287 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 TRIM77I1YAP6 450 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 CCSO14618 274 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 SLC22A5O76082 557 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 ACAA1P09110 424 aaPredicted RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 ZNF728P0DKX0 622 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 RCC1P18754 421 aaPredicted RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 AADACP22760 399 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 IL13RA1P78552 427 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 CCL8P80075 99 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 TNFAIP6P98066 277 aaPredicted RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 SMIM21Q3B7S5 101 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 AWAT1Q58HT5 328 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 AVPI1Q5T686 147 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 ZNF660Q6AZW8 331 aaPredicted RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 KCTD9Q7L273 389 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 OR2T35Q8NGX2 323 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 GRPEL2Q8TAA5 225 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 UBALD1Q8TB05 177 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 TMEM165Q9HC07 324 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 PIPOXQ9P0Z9 390 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 NPTNQ9Y639 398 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 TRRAPQ9Y4A5 3859 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 CEACAM18A8MTB9 384 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 TRDCB7Z8K6 153 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 PSPNO60542 156 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 SFT2D2O95562 160 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 IGHV2-5P01817 119 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 GLAP06280 429 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 GIPP09681 153 aaPredicted RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 TNFSF4P23510 183 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 CD80P33681 288 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 MDH2P40926 338 aaKnown RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 H2BFSP57053 126 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 HERV-K104P61576 105 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 COL10A1Q03692 680 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 SCGB2A2Q13296 93 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 HERPUD1Q15011 391 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 Q5BKY6 102 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 PRR31Q5SQ13 230 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 FAM201AQ5SY85 155 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 Q6ZS49 121 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 RIMS4Q9H426 269 aaPredicted RBP8.24□□□□□ -1.09
TPM3-210ENST00000368530 DNAJB11Q9UBS4 358 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 TRAPPC2LQ9UL33 140 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 WIPI2Q9Y4P8 454 aa8.24□□□□□ -1.09
TPM3-210ENST00000368530 IGKV1-6A0A0C4DH72 117 aa8.23□□□□□ -1.09
TPM3-210ENST00000368530 KIR2DS1A0A191URI9 304 aa8.23□□□□□ -1.09
TPM3-210ENST00000368530 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
TPM3-210ENST00000368530 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.23□□□□□ -1.09
TPM3-210ENST00000368530 TMPRSS2O15393 492 aa8.23□□□□□ -1.09
TPM3-210ENST00000368530 CYB5R3P00387 301 aaPredicted RBP8.23□□□□□ -1.09
TPM3-210ENST00000368530 CTSDP07339 412 aaPredicted RBP8.23□□□□□ -1.09
TPM3-210ENST00000368530 ERP29P30040 261 aaKnown RBP8.23□□□□□ -1.09
TPM3-210ENST00000368530 KIR2DS4P43632 304 aa8.23□□□□□ -1.09
TPM3-210ENST00000368530 GABRA2P47869 451 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms