RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 IMMP2LQ96T52 175 aa12.86□□□□□ -0.35
SHC1-205ENST00000368453 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 NPIPA2E9PIF3 369 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 NPIPA3F8WFD2 350 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 CHRNB4P30926 498 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 PLPPR5Q32ZL2 321 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 TMEM211Q6ICI0 200 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 Q6ZRM9 215 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 ZDHHC23Q8IYP9 409 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 OR10G3Q8NGC4 313 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 KLHDC7BQ96G42 594 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 ULBP2Q9BZM5 246 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 TMEM9BQ9NQ34 198 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 PGLYRP1O75594 196 aaPredicted RBP12.85□□□□□ -0.35
SHC1-205ENST00000368453 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 MMDQ15546 238 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 COL5A1-AS1Q5SY13 56 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 C9orf50Q5SZB4 431 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 OR1L3Q8NH93 324 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 C2orf16Q68DN1 1984 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 C20orf202A1L168 122 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 CDKN1AP38936 164 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 BLKP51451 505 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 KRTDAPP60985 99 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 SERF2P84101 59 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 BAGE3Q86Y29 109 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 ZNF611Q8N823 705 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 SGMS2Q8NHU3 365 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 UBALD1Q8TB05 177 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 HLA-CQ95604 372 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
SHC1-205ENST00000368453 ABHD14BQ96IU4 210 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
SHC1-205ENST00000368453 OBP2AQ9NY56 170 aa12.85□□□□□ -0.35
SHC1-205ENST00000368453 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
SHC1-205ENST00000368453 DHHO43323 396 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 CLDN1O95832 211 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 ALKBH2Q6NS38 261 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 HS3ST3A1Q9Y663 406 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 URB1O60287 2271 aaKnown RBP12.84□□□□□ -0.35
SHC1-205ENST00000368453 CACNA1DQ01668 2161 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 RBM11P57052 281 aaKnown RBP12.84□□□□□ -0.35
SHC1-205ENST00000368453 TPPP2P59282 170 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 ZNF441Q8N8Z8 693 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 CHD9Q3L8U1 2897 aa12.84□□□□□ -0.35
SHC1-205ENST00000368453 TNFSF13O75888 250 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 CCNOP22674 350 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 F2RP25116 425 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 MSX1P28360 303 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 MPLP40238 635 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 ANKRD39Q53RE8 183 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 OR10G9Q8NGN4 311 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 OR10G7Q8NGN6 311 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 TAF15Q92804 592 aaKnown RBP eCLIP12.83□□□□□ -0.36
SHC1-205ENST00000368453 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 UCN2Q96RP3 112 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
SHC1-205ENST00000368453 IL23AQ9NPF7 189 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 ERRFI1Q9UJM3 462 aaPredicted RBP12.83□□□□□ -0.36
SHC1-205ENST00000368453 ABCA7Q8IZY2 2146 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 CTSSP25774 331 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 ADMP35318 185 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 SRP14P37108 136 aaKnown RBP12.83□□□□□ -0.36
SHC1-205ENST00000368453 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 Q6ZWC4 215 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 RLN3Q8WXF3 142 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 TXN2Q99757 166 aa12.83□□□□□ -0.36
SHC1-205ENST00000368453 CRYABP02511 175 aaKnown RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 KCNMB1Q16558 191 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 OR5D13Q8NGL4 314 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 NEIL1Q96FI4 390 aaPredicted RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 PSMG3Q9BT73 122 aaPredicted RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 KCNS2Q9ULS6 477 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 UMODP07911 640 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 C1QTNF9P0C862 333 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 ZNF468Q5VIY5 522 aaPredicted RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 NUFIP2Q7Z417 695 aaKnown RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 HAPLN4Q86UW8 402 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 WDYHV1Q96HA8 205 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 IL36RNQ9UBH0 155 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 TRAV39A0A0B4J263 110 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 C11orf94C9JXX5 98 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 TMEM250H0YL14 139 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 HS3ST1O14792 307 aa12.82□□□□□ -0.36
SHC1-205ENST00000368453 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
SHC1-205ENST00000368453 CARD18P57730 90 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms