RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 GCDHQ92947 438 aaPredicted RBP12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 SOSTQ9BQB4 213 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 HDHD3Q9BSH5 251 aaPredicted RBP12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 CCDC32Q9BV29 185 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 PECRQ9BY49 303 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 CHIAQ9BZP6 476 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 MBNL3Q9NUK0 354 aaKnown RBP12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 AK3Q9UIJ7 227 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 TBL2Q9Y4P3 447 aaKnown RBP12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 ETV7Q9Y603 341 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 hCG_2014768A0A024R1R8 64 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 IGHV3-43A0A0B4J1X8 118 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 CLDN34H7C241 214 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 IGLV1-47P01700 117 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 IGHV3-43DP0DP04 118 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 RAB6AP20340 208 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 GZMHP20718 246 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 PLA1AQ53H76 456 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 GDPD1Q8N9F7 314 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 POC5Q8NA72 575 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR56B1Q8NGI3 324 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR1L1Q8NH94 360 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 SSMEM1Q8WWF3 244 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 S100A16Q96FQ6 103 aaKnown RBP12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 ABHD1Q96SE0 405 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.46
SMPDL3A-201ENST00000368440 ORC5O43913 435 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 NAPSAO96009 420 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 PTHLHP12272 177 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 RANBP1P43487 201 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 Q6ZTK2 550 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 MEGF9Q9H1U4 602 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 HSF4Q9ULV5 492 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 KCNK7Q9Y2U2 307 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 COL6A5A8TX70 2615 aa12.2□□□□□ -0.46
SMPDL3A-201ENST00000368440 RAB27BO00194 218 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 HBZP02008 142 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 GNG10P50151 68 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 LOXL3P58215 753 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 SSX2Q16385 188 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 TMEM69Q5SWH9 247 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 C6orf183Q5T699 404 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 TRIQKQ629K1 86 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR10A7Q8NGE5 316 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 ZMAT3Q9HA38 289 aaKnown RBP12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 PSG11Q9UQ72 335 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 HILPDAQ9Y5L2 63 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 POMT1Q9Y6A1 747 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 A0A1W2PPE3 182 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 F2RL2O00254 374 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 SDCBPO00560 298 aaPredicted RBP12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 TMEM127O75204 238 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 PYHIN1Q6K0P9 492 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 TMEM86BQ8N661 226 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR10R2Q8NGX6 335 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 PTX4Q96A99 478 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 PHF21AQ96BD5 680 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 SSX3Q99909 188 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 ABCG5Q9H222 651 aa12.19□□□□□ -0.46
SMPDL3A-201ENST00000368440 H3BUX3 64 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 J3QR06 171 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 TOR1AO14656 332 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 HTR1DP28221 377 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 INPP1P49441 399 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 DGCR2P98153 550 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 FAM189A2Q15884 450 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 MINOS1Q5TGZ0 78 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 CENPSQ8N2Z9 138 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 SETD6Q8TBK2 473 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 ZNF596Q8TC21 504 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 PIFOQ8TCI5 191 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 RAB3CQ96E17 227 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 DPAGT1Q9H3H5 408 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 GFOD1Q9NXC2 390 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 MINOS1-NBL1R4GNA1 71 aa12.18□□□□□ -0.46
SMPDL3A-201ENST00000368440 FAM181BA6NEQ2 426 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 MFNGO00587 321 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 SPINT2O43291 252 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 LANCL1O43813 399 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 CD3GP09693 182 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 GNB3P16520 340 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 RAB13P51153 203 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 ACTG1P63261 375 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 GNMTQ14749 295 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 HMGN3Q15651 99 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 TRIM16LQ309B1 348 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 ZNF57Q68EA5 555 aaPredicted RBP12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 TRAT1Q6PIZ9 186 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR10V1Q8NGI7 309 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 OR52M1Q8NGK5 317 aa12.17□□□□□ -0.46
SMPDL3A-201ENST00000368440 CMTM3Q96MX0 182 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms