RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 LDLRAD3Q86YD5 345 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 FAM90A1Q86YD7 464 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 BPIFB2Q8N4F0 458 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 SLC25A21Q9BQT8 299 aaPredicted RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 ST6GALNAC5Q9BVH7 336 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 TOLLIPQ9H0E2 274 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 ARL6Q9H0F7 186 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 ZNF701Q9NV72 531 aaPredicted RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 C1orf123Q9NWV4 160 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 PCDHB10Q9UN67 800 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 VPS13CQ709C8 3753 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 POM121CA8CG34 1229 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 C17orf100A8MU93 164 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 SRRM5B3KS81 715 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 M0QYG6 137 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 SH2D1BO14796 132 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 DEGS1O15121 323 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 NAPSAO96009 420 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 CXCL2P19875 107 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 AMY2BP19961 511 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 GLRA1P23415 457 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 LOXP28300 417 aaPredicted RBP10.15□□□□□ -0.78
USF1-203ENST00000368021 DUSP1P28562 367 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 S100A2P29034 98 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 TNFAIP6P98066 277 aaPredicted RBP10.15□□□□□ -0.78
USF1-203ENST00000368021 BRICD5Q6PL45 260 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 ARRDC1Q8N5I2 433 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 SUMF2Q8NBJ7 301 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 OR5AP2Q8NGF4 316 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 Q8TCH9 128 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 ITLN1Q8WWA0 313 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 ARL11Q969Q4 196 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.78
USF1-203ENST00000368021 RIMS4Q9H426 269 aaPredicted RBP10.15□□□□□ -0.78
USF1-203ENST00000368021 MGAT4CQ9UBM8 478 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 ZNF230Q9UIE0 474 aaPredicted RBP10.15□□□□□ -0.78
USF1-203ENST00000368021 POMT1Q9Y6A1 747 aa10.15□□□□□ -0.78
USF1-203ENST00000368021 B9A039 149 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 G3V3Q6 166 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 AP4M1O00189 453 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 TCAPO15273 167 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 OR2H2O95918 312 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 KNG1P01042 644 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 ZNF44P15621 663 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 LMO1P25800 156 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 KRTAP10-9P60411 292 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 TESK1Q15569 626 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 SAPCD1Q5SSQ6 148 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 GLDNQ6ZMI3 551 aaPredicted RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 Q6ZS49 121 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 C1QL4Q86Z23 238 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 OR5H2Q8NGV7 314 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 RXFP4Q8TDU9 374 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 LRRC29Q8WV35 223 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 SLC6A7Q99884 636 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 GCM1Q9NP62 436 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 ANXA10Q9UJ72 324 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 MAST4O15021 2626 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 TRBV6-6A0A0A6YYG2 114 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 IFNL4K9M1U5 179 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 SLC33A1O00400 549 aaPredicted RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 OR2F2O95006 317 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 HAND1O96004 215 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 LHBP01229 141 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 IFNA6P05013 189 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 LINC00614P0C842 121 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 TNFRSF1AP19438 455 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 MDH2P40926 338 aaKnown RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 OR2F1Q13607 317 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 ZNF672Q499Z4 452 aaPredicted RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 ZNF660Q6AZW8 331 aaPredicted RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 BEND2Q8NDZ0 799 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 DYRK2Q92630 601 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 R3HDM4Q96D70 268 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 WDR13Q9H1Z4 485 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 CISD1Q9NZ45 108 aaKnown RBP10.14□□□□□ -0.79
USF1-203ENST00000368021 ARFGEF3Q5TH69 2177 aa10.14□□□□□ -0.79
USF1-203ENST00000368021 KANTRA0A1W2PQU2 76 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 HS3ST1O14792 307 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 WNT9BO14905 357 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 IGHV2-5P01817 119 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 MBP02144 154 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 PMP2P02689 132 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 RCC1P18754 421 aaPredicted RBP10.13□□□□□ -0.79
USF1-203ENST00000368021 CHRFAM7AQ494W8 412 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 SPRNQ5BIV9 151 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 EIF5AL1Q6IS14 154 aaKnown RBP10.13□□□□□ -0.79
USF1-203ENST00000368021 LPCAT3Q6P1A2 487 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 MOGAT3Q86VF5 341 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 GCSAMQ8N6F7 178 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 NEK7Q8TDX7 302 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 FAM222BQ8WU58 562 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 RDH5Q92781 318 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 NEUROG1Q92886 237 aa10.13□□□□□ -0.79
USF1-203ENST00000368021 PIK3IP1Q96FE7 263 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms