RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 MRPS18BQ9Y676 258 aaKnown RBP13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 CTXND1A0A1B0GTU2 59 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 NKX2-6A6NCS4 301 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 MVDP53602 400 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 PRSS8Q16651 343 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 hCG_38984A0A1B0GV85 526 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 SPINT1O43278 529 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 RBM11P57052 281 aaKnown RBP13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 INPP5JQ15735 1006 aaPredicted RBP13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF502Q8TBZ5 544 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 RSG1Q9BU20 258 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 NKX2-8O15522 239 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 UNQ9370/PRO34162Q6UXP9 181 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 DPPA3Q6W0C5 159 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 MRGPRGQ86SM5 289 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 BPIFA4PQ86YQ2 179 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 ACAA1P09110 424 aaPredicted RBP13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 FAM209AQ5JX71 171 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 C19orf48Q6RUI8 117 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 CHRNA10Q9GZZ6 450 aa13.67□□□□□ -0.22
NUCKS1-201ENST00000367142 HRKO00198 91 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 TSPOP30536 169 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 CEACAM21Q3KPI0 293 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 SCMH1Q96GD3 660 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 WNT2BQ93097 391 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 RAB33BQ9H082 229 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 S1PR2O95136 353 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 MMD2Q8IY49 270 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 GPA33Q99795 319 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF385DQ9H6B1 395 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 NEU3Q9UQ49 428 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 DLL1O00548 723 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 COX6CP09669 75 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 SCGB1A1P11684 91 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 CENPVQ7Z7K6 275 aaPredicted RBP13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 ITLN1Q8WWA0 313 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 MRAP2Q96G30 205 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 HBZP02008 142 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 SNRPEP62304 92 aaKnown RBP13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 PSG9Q00887 426 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 KLRB1Q12918 225 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 LY6EQ16553 131 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 PLPPR5Q32ZL2 321 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 SEZ6L2Q6UXD5 910 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 ZCCHC14Q8WYQ9 949 aaKnown RBP13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 DYRK2Q92630 601 aa13.66□□□□□ -0.22
NUCKS1-201ENST00000367142 AP4M1O00189 453 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 CXorf66Q5JRM2 361 aaPredicted RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 OR4B1Q8NGF8 309 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 OR1K1Q8NGR3 316 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF385AQ96PM9 386 aaKnown RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 TBX15Q96SF7 602 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 TMEM204Q9BSN7 226 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 CDC42EP3Q9UKI2 254 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 IER3P46695 156 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 WDFY1Q8IWB7 410 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 ABHD14BQ96IU4 210 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 MRPS16Q9Y3D3 137 aaKnown RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 LOC389332A0A1B0GUA5 103 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 IFITM10A6NMD0 228 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 CEBPDP49716 269 aaPredicted RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 RCC2Q9P258 522 aaKnown RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 IL19Q9UHD0 177 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 TJP1Q07157 1748 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 CDRT15L2A8MXV6 281 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF501Q96CX3 271 aaPredicted RBP13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 SNX22Q96L94 193 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 KCNAB3O43448 404 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 CRHP06850 196 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF488Q96MN9 340 aa13.65□□□□□ -0.22
NUCKS1-201ENST00000367142 NTN1O95631 604 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 MFAP4P55083 255 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 DLK1P80370 383 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 A0A1B0GUL6 1792 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 SNURFLB1AK76 121 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 BHLHA9Q7RTU4 235 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 LIMS2Q7Z4I7 341 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 IDI2-AS1Q9NZ38 188 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 UPK3AO75631 287 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 ZP4Q12836 540 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 PPIAL4CA0A0B4J2A2 164 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 TMEM238LA0A1B0GVL6 79 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 A6NJY4 79 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 PPIAL4GP0DN37 164 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 TUBA4BQ9H853 241 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 LOC105371242A0A075B767 164 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms