RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 TNNT2P45379 298 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 SERPINB9P50453 376 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 HTD2P86397 168 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 RAB31Q13636 194 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 RIPPLY2Q5TAB7 128 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 SOSTDC1Q6X4U4 206 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 SSX7Q7RTT5 188 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 CCDC91Q7Z6B0 441 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 GABRG1Q8N1C3 465 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 OR1L8Q8NGR8 309 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 OR5K2Q8NHB8 316 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 ING5Q8WYH8 240 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 RPEQ96AT9 228 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 PPWD1Q96BP3 646 aaKnown RBP-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 COQ2Q96H96 371 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 ERMAPQ96PL5 475 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 VAT1Q99536 393 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 ROPN1BQ9BZX4 212 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 C2orf40Q9H1Z8 148 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 C11orf1Q9H5F2 150 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 THAP9Q9H5L6 903 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 MED29Q9NX70 200 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 TMEM14CQ9P0S9 112 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 ACTR3BQ9P1U1 418 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 TBC1D24Q9ULP9 559 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 SNX12Q9UMY4 172 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 SCML1Q9UN30 329 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 ORC6Q9Y5N6 252 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 U3KQV3 271 aa-1.19□□□□□ -2.6
RNU6-54P-201ENST00000365563 PKD1P98161 4303 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 ITPR2Q14571 2701 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 MIA3Q5JRA6 1907 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 TRBV30A0A0K0K1B3 111 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 A0A1W2PPE3 182 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 LOC105371045A0A1W2PR82 267 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 IRGMA1A4Y4 181 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 OR51F1A6NGY5 319 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 PCP4L1A6NKN8 68 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 H7C2G1 150 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 POLR3GO15318 223 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 TIMM8AO60220 97 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 DHRS3O75911 302 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 TTC4O95801 387 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 DNAL4O96015 105 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 ATP6V1C1P21283 382 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 ATP6V0CP27449 155 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 OR1E1P30953 314 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 GABRA3P34903 492 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 ACAA2P42765 397 aaKnown RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 CRYBB2P43320 205 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 TNNT3P45378 269 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 TSPEAR-AS2P59090 65 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 RAB4BP61018 213 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 BNIP2Q12982 314 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 SCGB2A2Q13296 93 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 GPR176Q14439 515 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 CDNFQ49AH0 187 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 NXNL2Q5VZ03 156 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 TTC23LQ6PF05 361 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 WDR82Q6UXN9 313 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 LINC00322Q6ZN03 302 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 CCNYL1Q8N7R7 359 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 DRAXINQ8NBI3 349 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 OR1L4Q8NGR5 311 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 RAB1CQ92928 201 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 RCN3Q96D15 328 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 LRRC39Q96DD0 335 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 JSRP1Q96MG2 331 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 OLFM3Q96PB7 478 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 OR2M4Q96R27 311 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 CHID1Q9BWS9 393 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 IMUPQ9GZP8 106 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 RIBC2Q9H4K1 309 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 MYH16Q9H6N6 1097 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 CLN6Q9NWW5 311 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 FLVCR2Q9UPI3 526 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 DNAH1Q9P2D7 4330 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 CUBNO60494 3623 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 GVINP1Q7Z2Y8 2422 aa-1.2□□□□□ -2.6
RNU6-54P-201ENST00000365563 SRCAPQ6ZRS2 3230 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 TRAV26-1A0A087WT03 109 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 ODAMA1E959 279 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 C21orf140B9A014 251 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 J3QT63 122 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 K7EQS6 105 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 KCNK1O00180 336 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 SIRPB1O00241 398 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 TXNDC9O14530 226 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 NDUFAB1O14561 156 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 TCAPO15273 167 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 AKR7A2O43488 359 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 ANXA5P08758 320 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 PPP1CCP36873 323 aaKnown RBP-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 CNBPP62633 177 aaKnown RBP-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 SLC35A1P78382 337 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 FAM3AP98173 230 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 BSPH1Q075Z2 132 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 CBX3Q13185 183 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 XRCC4Q13426 336 aa-1.21□□□□□ -2.6
RNU6-54P-201ENST00000365563 KCNJ8Q15842 424 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms