RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 APCSP02743 223 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ZPBPQ9BS86 351 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 GZMBP10144 247 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 AKR1C3P42330 323 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 GPM6AP51674 278 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 QRFPP83859 136 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 GATSQ8NAP1 163 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 ISOC2Q96AB3 205 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 FOXD3Q9UJU5 478 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-204ENST00000358025 ST3GAL6Q9Y274 331 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 PRRT4C9JH25 899 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CLDN14O95500 239 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 UMODP07911 640 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CTLA4P16410 223 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CDC34P49427 236 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-204ENST00000358025 SSR4P51571 173 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 UBE2V1Q13404 147 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 NR0B2Q15466 257 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 LRRC75AQ8NAA5 344 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 OR8B12Q8NGG6 310 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 ULBP3Q9BZM4 244 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 PRNDQ9UKY0 176 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CDIPTO14735 213 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 PPP1R17O96001 155 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 IL15RAQ13261 267 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CYTL1Q9NRR1 136 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 PI3P19957 117 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 GABRA6Q16445 453 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM215Q68D42 235 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 MRPL30Q8TCC3 161 aaKnown RBP3.59□□□□□ -1.84
SYNE2-204ENST00000358025 TSPAN32Q96QS1 320 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CACNG5Q9UF02 275 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 IRF2P14316 349 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 C2orf68Q2NKX9 166 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CENPVQ7Z7K6 275 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-204ENST00000358025 FAM131CQ96AQ9 280 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 IGKV1-8A0A0C4DH67 115 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CCDC163A0A0D9SF12 145 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 IFNL4K9M1U5 179 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 OR1L4Q8NGR5 311 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 OR13G1Q8NGZ3 307 aa3.59□□□□□ -1.84
SYNE2-204ENST00000358025 CHCHD1Q96BP2 118 aaKnown RBP3.59□□□□□ -1.84
SYNE2-204ENST00000358025 DIRC3C9JPN6 131 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TNFSF11O14788 317 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SIAH2O43255 324 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 RAMP1O60894 148 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CEACAM21Q3KPI0 293 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CARD17Q5XLA6 110 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ACSM6Q6P461 480 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 KCNK17Q96T54 332 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ATXN7L1Q9ULK2 861 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CADP27708 2225 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 RPL36A-HNRNPH2H7BZ11 118 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 RBFOX2O43251 390 aaKnown RBP eCLIP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TRAPPC6AO75865 159 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TTRP02766 147 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 AREGP15514 252 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 Q0VG73 95 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 Q8NFD4 153 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 NEUROG1Q92886 237 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 WBP1Q96G27 269 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 MRPL32Q9BYC8 188 aaKnown RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 IGLV3-32A0A0A0MS00 114 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 GAGE10A6NGK3 116 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM130Q8N3G9 435 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CDX2Q99626 313 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 FAM90A1Q86YD7 464 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 S1PR3Q99500 378 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 DHCR7Q9UBM7 475 aaKnown RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ASCL4Q6XD76 172 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CD207Q9UJ71 328 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CD1BP29016 333 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ARL3P36405 182 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 GRAMD2BQ96HH9 432 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 PLXNA3P51805 1871 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 PAPPA2Q9BXP8 1791 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SHISA3A0PJX4 238 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SLC38A11Q08AI6 406 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF774Q6NX45 483 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ATP5L2Q7Z4Y8 100 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SMIM14Q96QK8 99 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 VN1R1Q9GZP7 353 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TSPAN2O60636 221 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 KIR3DL2P43630 455 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 FABP6P51161 128 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ERVFRD-1P60508 538 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SUMF1Q8NBK3 374 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 PRO1933Q9H354 126 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ASCL3Q9NQ33 180 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SLC17A3O00476 420 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 S1PR2O95136 353 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 PPBPP02775 128 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 BATFQ16520 125 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SMIM21Q3B7S5 101 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM11P17152 192 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ID3Q02535 119 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 RPEL1Q2QD12 228 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR51G1Q8NGK1 321 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR4S2Q8NH73 311 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms