RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 MCRIP2Q9BUT9 160 aaKnown RBP12.43□□□□□ -0.42
PDGFA-201ENST00000354513 MRPS26Q9BYN8 205 aaKnown RBP12.43□□□□□ -0.42
PDGFA-201ENST00000354513 ING4Q9UNL4 249 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 CCL24O00175 119 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 SDCBPO00560 298 aaPredicted RBP12.42□□□□□ -0.42
PDGFA-201ENST00000354513 CD1AP06126 327 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 CPEP16870 476 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF137PP52743 207 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 SLC35B1P78383 322 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 GPR50Q13585 617 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 TPBGQ13641 420 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 MPV17LQ2QL34 196 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 LIPKQ5VXJ0 399 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 FAM71E2Q8N5Q1 922 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 ARL11Q969Q4 196 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 PGLYRP3Q96LB9 341 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 METTL9Q9H1A3 318 aa12.42□□□□□ -0.42
PDGFA-201ENST00000354513 RCC2Q9P258 522 aaKnown RBP12.42□□□□□ -0.42
PDGFA-201ENST00000354513 LSM4Q9Y4Z0 139 aaKnown RBP12.42□□□□□ -0.42
PDGFA-201ENST00000354513 TRAV8-7A0A075B6U6 113 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 TRBV5-5A0A0J9YX44 114 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 AP4M1O00189 453 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 MAGEB3O15480 346 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 ORC5O43913 435 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 MT-ND4P03905 459 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF93P35789 620 aaPredicted RBP12.41□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF134P52741 427 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 RPS11P62280 158 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDGFA-201ENST00000354513 DGCR2P98153 550 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 SYT6Q5T7P8 510 aaPredicted RBP12.41□□□□□ -0.42
PDGFA-201ENST00000354513 LINC00596Q86U02 117 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 OR2T10Q8NGZ9 312 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 MUL1Q969V5 352 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 S1PR3Q99500 378 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 TMED9Q9BVK6 235 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 TMEM138Q9NPI0 162 aa12.41□□□□□ -0.42
PDGFA-201ENST00000354513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDGFA-201ENST00000354513 NCBP2LA6PVI3 153 aaKnown RBP12.4□□□□□ -0.42
PDGFA-201ENST00000354513 GZMHP20718 246 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 CD1BP29016 333 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 BDKRB2P30411 391 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 F2RL1P55085 397 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 GP2P55259 537 aaKnown RBP12.4□□□□□ -0.42
PDGFA-201ENST00000354513 FOXE3Q13461 319 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 FHL3Q13643 280 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 PNLIPRP3Q17RR3 467 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 YIF1BQ5BJH7 314 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 SLC25A48Q6ZT89 311 aaKnown RBP12.4□□□□□ -0.42
PDGFA-201ENST00000354513 C5orf24Q7Z6I8 188 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 GAPTQ8N292 157 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
PDGFA-201ENST00000354513 GPX5O75715 221 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 CD2P06729 351 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 CDX1P47902 265 aaPredicted RBP12.39□□□□□ -0.43
PDGFA-201ENST00000354513 RPS25P62851 125 aaKnown RBP12.39□□□□□ -0.43
PDGFA-201ENST00000354513 KIR2DS1Q14954 304 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 SSX1Q16384 188 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 Q3ZCU0 254 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 CT45A1Q5HYN5 189 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 ATAD3CQ5T2N8 411 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 ASPHD1Q5U4P2 390 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 MS4A15Q8N5U1 240 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 CT45A3Q8NHU0 189 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 PRR25Q96S07 402 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 SCOCQ9UIL1 159 aa12.39□□□□□ -0.43
PDGFA-201ENST00000354513 AIPO00170 330 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 MOSP00540 346 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 IGHG4P01861 327 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
PDGFA-201ENST00000354513 PSMB8P28062 276 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 RAB25P57735 213 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 PPP3R1P63098 170 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 OR10V1Q8NGI7 309 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 OR1L1Q8NH94 360 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 NDUFB11Q9NX14 153 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
PDGFA-201ENST00000354513 TRBV5-7A0A0A0MS05 114 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 HBZP02008 142 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 ELANEP08246 267 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 FSTP19883 344 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 LSAMPQ13449 338 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
PDGFA-201ENST00000354513 GNMTQ14749 295 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 TRAM1Q15629 374 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 Q499Y3 187 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 CXorf66Q5JRM2 361 aaPredicted RBP12.37□□□□□ -0.43
PDGFA-201ENST00000354513 SIGIRRQ6IA17 410 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 ODF3L1Q8IXM7 274 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 OR8U1Q8NH10 309 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 OR4K15Q8NH41 348 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 OR14A2Q96R54 314 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 ZNF580Q9UK33 172 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 SC5DO75845 299 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms