RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 FCGR3BO75015 233 aa12.73□□□□□ -0.37
NUP50-201ENST00000347635 APOA2P02652 100 aa12.73□□□□□ -0.37
NUP50-201ENST00000347635 NDUFB7P17568 137 aa12.73□□□□□ -0.37
NUP50-201ENST00000347635 RTL8BQ17RB0 113 aa12.73□□□□□ -0.37
NUP50-201ENST00000347635 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
NUP50-201ENST00000347635 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
NUP50-201ENST00000347635 CXorf65A6NEN9 183 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 AHRRA9YTQ3 701 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 NPIPB7O75200 414 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 SUMO1P63165 101 aaKnown RBP12.72□□□□□ -0.37
NUP50-201ENST00000347635 SERF2P84101 59 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 CEACAM21Q3KPI0 293 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 FAM166AQ6J272 317 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 BTNL3Q6UXE8 466 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 DTD1Q8TEA8 209 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 A0A1W2PR80 420 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 CDX1P47902 265 aaPredicted RBP12.72□□□□□ -0.37
NUP50-201ENST00000347635 C16orf82Q7Z2V1 217 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 RSG1Q9BU20 258 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 SPTBP11277 2137 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 KRTDAPP60985 99 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
NUP50-201ENST00000347635 MRPL30Q8TCC3 161 aaKnown RBP12.72□□□□□ -0.37
NUP50-201ENST00000347635 VAMP8Q9BV40 100 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 SSTP61278 116 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 UBE2G1P62253 170 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 KCNMB1Q16558 191 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 MEGF10Q96KG7 1140 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 FUT9Q9Y231 359 aa12.72□□□□□ -0.37
NUP50-201ENST00000347635 SCN8AQ9UQD0 1980 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 J3QT63 122 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 NTF3P20783 257 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 G0S2P27469 103 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 ZNF880Q6PDB4 577 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 MYPOPQ86VE0 399 aaPredicted RBP12.71□□□□□ -0.37
NUP50-201ENST00000347635 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 ENSAO43768 121 aaKnown RBP12.71□□□□□ -0.37
NUP50-201ENST00000347635 RAMP1O60894 148 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 INO80CQ6PI98 192 aaPredicted RBP12.71□□□□□ -0.37
NUP50-201ENST00000347635 MARS2Q96GW9 593 aaKnown RBP12.71□□□□□ -0.37
NUP50-201ENST00000347635 TP53RKQ96S44 253 aa12.71□□□□□ -0.37
NUP50-201ENST00000347635 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 NKX2-8O15522 239 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 TRAT1Q6PIZ9 186 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 ETV3LQ6ZN32 361 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 RFESDQ8TAC1 157 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 UNC13CQ8NB66 2214 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 PRR19A6NJB7 356 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 PGLYRP1O75594 196 aaPredicted RBP12.71□□□□□ -0.38
NUP50-201ENST00000347635 SUB1P53999 127 aaKnown RBP eCLIP12.71□□□□□ -0.38
NUP50-201ENST00000347635 PLPPR2Q96GM1 343 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 DMRT1Q9Y5R6 373 aa12.71□□□□□ -0.38
NUP50-201ENST00000347635 TRAV39A0A0B4J263 110 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 DVL1O14640 695 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 CLN5O75503 358 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 ZNF83P51522 516 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 HIKESHIQ53FT3 197 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 ZNF488Q96MN9 340 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 A0A0A6YYD4 124 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 PAGE4O60829 102 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 TMEM251Q8N6I4 163 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 GALNT14Q96FL9 552 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 PLXNA4Q9HCM2 1894 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 ARID1AO14497 2285 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 OOEPA6NGQ2 149 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 G6PCP35575 357 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 PPP1R32Q7Z5V6 425 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
NUP50-201ENST00000347635 GYPAP02724 150 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 SRSF4Q08170 494 aaKnown RBP12.7□□□□□ -0.38
NUP50-201ENST00000347635 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 ZNF818PQ6ZRF7 136 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 GGACTQ9BVM4 153 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 MRPL13Q9BYD1 178 aaKnown RBP12.7□□□□□ -0.38
NUP50-201ENST00000347635 DOK5Q9P104 306 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 CNTRLQ7Z7A1 2325 aa12.7□□□□□ -0.38
NUP50-201ENST00000347635 IGLV3-12A0A075B6K2 115 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 HAND1O96004 215 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CLPSP04118 112 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 FBP1P09467 338 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 FAM122AQ96E09 287 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 RNF122Q9H9V4 155 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 GSN-AS1Q9NRJ2 163 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CYTL1Q9NRR1 136 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 PDE6DO43924 150 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 LYZL6O75951 148 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 KLF3P57682 345 aaPredicted RBP12.69□□□□□ -0.38
NUP50-201ENST00000347635 FAM3BP58499 235 aaPredicted RBP12.69□□□□□ -0.38
NUP50-201ENST00000347635 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 GPHA2Q96T91 129 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 SRXN1Q9BYN0 137 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 TRBV23-1A0A0A0MS06 115 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CDIPTO14735 213 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms