RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PLPPR2Q96GM1 343 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 BOKQ9UMX3 212 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 RP1L1Q8IWN7 2480 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 IGKV1D-33P01593 117 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 IGKV1-33P01594 117 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 ECI1P42126 302 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 FGF8P55075 233 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 OR2B8PP59922 312 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 ERVK11-1P61568 191 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 RPS23P62266 143 aaKnown RBP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 IL13RA2Q14627 380 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 ICAM4Q14773 271 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 FAM76BQ5HYJ3 339 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 RTL6Q6ICC9 239 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 H1FOOQ8IZA3 346 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 NEK7Q8TDX7 302 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 APOBEC3DQ96AK3 386 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 C12orf57Q99622 126 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 RNF122Q9H9V4 155 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 TMED3Q9Y3Q3 217 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 HCFC1P51610 2035 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 CLEC18AA5D8T8 446 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 UMAD1C9J7I0 102 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 TRAPPC2LH3BP13 241 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 PRH1P02810 166 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 F2RP25116 425 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 CEBPGP53567 150 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 PLGLB1Q02325 96 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 PSG7Q13046 419 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 HES3Q5TGS1 186 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 BEND4Q6ZU67 534 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 C22orf34Q6ZV56 151 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 SPAG16Q8N0X2 631 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 FAM58AQ8N1B3 248 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 CLEC18CQ8NCF0 446 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 OR5A2Q8NGI9 324 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 SSX3Q99909 188 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 DDA1Q9BW61 102 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 FAM212BQ9NTI7 297 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 PUS1Q9Y606 427 aaKnown RBP eCLIP5.09□□□□□ -1.59
CLCN3-201ENST00000347613 DSCAMO60469 2012 aa5.09□□□□□ -1.59
CLCN3-201ENST00000347613 CEP250Q9BV73 2442 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 C5orf52A6NGY3 159 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.09□□□□□ -1.6
CLCN3-201ENST00000347613 PROP1O75360 226 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV3-13P01766 116 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV3-7P01780 117 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 SULT1A1P50225 295 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 ERVFRD-1P60508 538 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 SMCO1Q147U7 214 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 ARL6IP1Q15041 203 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 RNPS1Q15287 305 aaKnown RBP5.09□□□□□ -1.6
CLCN3-201ENST00000347613 SPINK9Q5DT21 86 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 GPR157Q5UAW9 335 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 VWA1Q6PCB0 445 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 CCDC54Q8NEL0 328 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 OR1L1Q8NH94 360 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 GATAD1Q8WUU5 269 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 SFT2D1Q8WV19 159 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 NCOR1P1Q9H4R4 102 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 TINAGQ9UJW2 476 aa5.09□□□□□ -1.6
CLCN3-201ENST00000347613 SPTBN2O15020 2390 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 CSMD2Q7Z408 3487 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 HMGB3O15347 200 aaKnown RBP5.08□□□□□ -1.6
CLCN3-201ENST00000347613 IGHEP01854 428 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 GRPP07492 148 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 OR8U8P0C7N1 319 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 METTL15P1P0C7V9 234 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 AGAP20933 346 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 IDH3GP51553 393 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-201ENST00000347613 NRN1LQ496H8 165 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF766Q5HY98 468 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 AVPI1Q5T686 147 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 RPRMLQ8N4K4 120 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 CYB561D1Q8N8Q1 229 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 OR52L2PQ8NGH6 319 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 CD300LFQ8TDQ1 290 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF391Q9UJN7 358 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 OR2W1Q9Y3N9 320 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 WSB1Q9Y6I7 421 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 M0R036 132 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 TK1P04183 234 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 SRP19P09132 144 aaKnown RBP5.08□□□□□ -1.6
CLCN3-201ENST00000347613 GLP1RP43220 463 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 AESQ08117 197 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 SWI5Q1ZZU3 235 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 MPV17LQ2QL34 196 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 FBXW9Q5XUX1 488 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 ADAM5Q6NVV9 412 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 BTNL3Q6UXE8 466 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF497Q6ZNH5 498 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 SLC25A40Q8TBP6 338 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 CACNG5Q9UF02 275 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 MMP24Q9Y5R2 645 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV3-43A0A0B4J1X8 118 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 A0A1B0GW55 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 C1QTNF9BB2RNN3 333 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4L2P0CJ85 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4L3P0CJ86 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4L4P0CJ87 422 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms