RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SPINT2O43291 252 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 CD37P11049 281 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 SVBPQ8N300 66 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 RPUSD4Q96CM3 377 aaKnown RBP11.32□□□□□ -0.6
CASC4-202ENST00000345795 DNPH1O43598 174 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 CSRP1P21291 193 aaKnown RBP11.32□□□□□ -0.6
CASC4-202ENST00000345795 PEA15Q15121 130 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 OR10Z1Q8NGY1 313 aa11.32□□□□□ -0.6
CASC4-202ENST00000345795 J3QT63 122 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 JTBO76095 146 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 GYPAP02724 150 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 RPS10P46783 165 aaKnown RBP11.31□□□□□ -0.6
CASC4-202ENST00000345795 RAB2AP61019 212 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 SOHLH1Q5JUK2 328 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 SLC25A22Q9H936 323 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 ABCA12Q86UK0 2595 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 LRP5LA4QPB2 252 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 LINC01387J3KSC0 135 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CASC4-202ENST00000345795 MUC1P15941 1255 aaPredicted RBP11.31□□□□□ -0.6
CASC4-202ENST00000345795 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 LRP4O75096 1905 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 TACC2O95359 2948 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 WNK1Q9H4A3 2382 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 LYNX1G3V0Z9 82 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 PSPNO60542 156 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 ACTL6BO94805 426 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 LYNX1P0DP58 116 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 PIGMQ9H3S5 423 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
CASC4-202ENST00000345795 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 RNASEK-C17orf49H0YIS7 233 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 SMPD2O60906 423 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 HKR1P10072 659 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
CASC4-202ENST00000345795 NTNG2Q96CW9 530 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 SLC2A8Q9NY64 477 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 ZNRD1Q9P1U0 126 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 CRYM-AS1A6NIL9 109 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 C1QTNF12Q5T7M4 302 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 OR5P3Q8WZ94 311 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 MPC1Q9Y5U8 109 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 TOX4O94842 621 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 HBZP02008 142 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 HOXA1P49639 335 aaPredicted RBP11.3□□□□□ -0.6
CASC4-202ENST00000345795 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
CASC4-202ENST00000345795 TNFAIP6P98066 277 aaPredicted RBP11.3□□□□□ -0.6
CASC4-202ENST00000345795 SMIM21Q3B7S5 101 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 BCL2L2Q92843 193 aaPredicted RBP11.3□□□□□ -0.6
CASC4-202ENST00000345795 RARRES2Q99969 163 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 RSRP1Q9BUV0 290 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 OR2W1Q9Y3N9 320 aa11.3□□□□□ -0.6
CASC4-202ENST00000345795 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 C10orf142B7Z368 130 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 PAX6P26367 422 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 NPBWR1P48145 328 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 ERVK-16P61578 105 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 ACSF3Q4G176 576 aaPredicted RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 PUSL1Q8N0Z8 303 aaKnown RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 SLC25A31Q9H0C2 315 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 B3GALNT1O75752 331 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 GNB1P62873 340 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 FAM122CQ6P4D5 195 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 TECTBQ96PL2 329 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 NMES1Q9C002 83 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 TMEM30CPA0ZSE6 113 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 Q9N2K0 584 aa11.29□□□□□ -0.6
CASC4-202ENST00000345795 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
CASC4-202ENST00000345795 RAMP3O60896 148 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 LY6HO94772 140 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 CCL1P22362 96 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
CASC4-202ENST00000345795 CLPPQ16740 277 aaPredicted RBP11.28□□□□□ -0.6
CASC4-202ENST00000345795 GUK1Q16774 197 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 RPL39P5Q59GN2 51 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 FGF23Q9GZV9 251 aaPredicted RBP11.28□□□□□ -0.6
CASC4-202ENST00000345795 SHARPINQ9H0F6 387 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 TMEM127O75204 238 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 CLDN14O95500 239 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 CST4P01036 141 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms