RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 OR5A2Q8NGI9 324 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 ABHD14AQ9BUJ0 271 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 OR2T8A6NH00 312 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 NDUFB3O43676 98 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 CRYBA2P53672 197 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 LRRC10Q5BKY1 277 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 ZFP30Q9Y2G7 519 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 IGLV1-36A0A0B4J1U3 117 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 IGHV3-13P01766 116 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 IGHV3-7P01780 117 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 TNFRSF1AP19438 455 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 COL25A1Q9BXS0 654 aaPredicted RBP15.2■□□□□ 0.02
SPAST-202ENST00000345662 RNF122Q9H9V4 155 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 LOXL2Q9Y4K0 774 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 LMX1BO60663 402 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 SLC35B1P78383 322 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 CXXC4Q9H2H0 198 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 RNF222A6NCQ9 220 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 EML2O95834 649 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 SSX8Q7RTT4 187 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 OR8I2Q8N0Y5 310 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 VSTM2AQ8TAG5 236 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 NHSL1Q5SYE7 1610 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 C5orf52A6NGY3 159 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 FBLL1A6NHQ2 334 aaKnown RBP15.19■□□□□ 0.02
SPAST-202ENST00000345662 HBZP02008 142 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 HIST1H1BP16401 226 aaKnown RBP15.19■□□□□ 0.02
SPAST-202ENST00000345662 PLP1P60201 277 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 LYZP61626 148 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 STXBP6Q8NFX7 210 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 PCOLCE2Q9UKZ9 415 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 MSGN1A6NI15 193 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 NCBP2LA6PVI3 153 aaKnown RBP15.19■□□□□ 0.02
SPAST-202ENST00000345662 NGFRP08138 427 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 LINC01590Q5TEZ4 76 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 RASL10BQ96S79 203 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 TUBA4BQ9H853 241 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 ZDHHC8Q9ULC8 765 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 TRAV39A0A0B4J263 110 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 MPDU1O75352 247 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 ZNF506Q5JVG8 444 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 SCGB1D4Q6XE38 83 aa15.19■□□□□ 0.02
SPAST-202ENST00000345662 ZXDCQ2QGD7 858 aaPredicted RBP15.18■□□□□ 0.02
SPAST-202ENST00000345662 RHBDD2Q6NTF9 364 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 SMIM8Q96KF7 97 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 CDC42EP3Q9UKI2 254 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 RALYQ9UKM9 306 aaKnown RBP15.18■□□□□ 0.02
SPAST-202ENST00000345662 PRNDQ9UKY0 176 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 TRGV5A0A0B4J1U4 118 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 CDIPTO14735 213 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 SPINK2P20155 84 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 ZNF137PP52743 207 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 C10orf113Q5VZT2 155 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 GAL3ST2Q9H3Q3 398 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 KBTBD11O94819 623 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 GZMHP20718 246 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 C9orf40Q8IXQ3 194 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 OR52L2PQ8NGH6 319 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 WFIKKN1Q96NZ8 548 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 PXMP4Q9Y6I8 212 aa15.18■□□□□ 0.02
SPAST-202ENST00000345662 RPL7P18124 248 aaKnown RBP15.17■□□□□ 0.02
SPAST-202ENST00000345662 PSMB2P49721 201 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 WFDC8Q8IUA0 241 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 RBKSQ9H477 322 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 NPVFQ9HCQ7 196 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 ATAD5Q96QE3 1844 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 TRAV14DV4A0A0A6YYC5 116 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 TRPM6Q9BX84 2022 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 SCN3AQ9NY46 2000 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 hADV38S2A0JD32 116 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 IBA57Q5T440 356 aaKnown RBP15.17■□□□□ 0.02
SPAST-202ENST00000345662 FABP2P12104 132 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 COL9A1P20849 921 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 SLC25A34Q6PIV7 304 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 OR8G5Q8NG78 346 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 OR4X1Q8NH49 305 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 PARLQ9H300 379 aa15.17■□□□□ 0.02
SPAST-202ENST00000345662 KLF4O43474 513 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 IL11RAQ14626 422 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 SELENOHQ8IZQ5 122 aaKnown RBP15.16■□□□□ 0.02
SPAST-202ENST00000345662 FOXJ2Q9P0K8 574 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 FOXS1O43638 330 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 FLYWCH2Q96CP2 140 aaKnown RBP15.16■□□□□ 0.02
SPAST-202ENST00000345662 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 PERPQ96FX8 193 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 FZR1Q9UM11 496 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 CTAG1AP78358 180 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 TMEM187Q14656 261 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 TMEM14DPA8MWL7 114 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 SMAD4Q13485 552 aaKnown RBP15.16■□□□□ 0.02
SPAST-202ENST00000345662 DMRTA1Q5VZB9 504 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 Q6ZS52 159 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 OR2I1PQ8NGU4 316 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 PLA2G2FQ9BZM2 168 aa15.16■□□□□ 0.02
SPAST-202ENST00000345662 SRFP11831 508 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 COMPP49747 757 aaPredicted RBP15.15■□□□□ 0.02
SPAST-202ENST00000345662 HERPUD1Q15011 391 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 SLC35E4Q6ICL7 350 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms