RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PIGTQ969N2 578 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 LIN37Q96GY3 246 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 UBE2ZQ9H832 354 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 RBM7Q9Y580 266 aaKnown RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 MYO7AQ13402 2215 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 SAA2-SAA4A0A096LPE2 208 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 IGHV2-26A0A0B4J1V2 119 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 S100GP29377 79 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 LDLRAD2Q5SZI1 272 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF468Q5VIY5 522 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 Q6ZS49 121 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 TNFRSF14Q92956 283 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 ADIPOR1Q96A54 375 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 LOXL4Q96JB6 756 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 LYZL4Q96KX0 146 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 ADAMTS9Q9P2N4 1935 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 MDFIC2A0A1B0GVS7 189 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 IGHG1P01857 330 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 SRSF7Q16629 238 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMPD1-201ENST00000342245 FAM180AQ6UWF9 173 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 SFTPA1Q8IWL2 248 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 HRASLS2Q9NWW9 162 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 PIGLQ9Y2B2 252 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 NOTCH4Q99466 2003 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 OR5B21A6NL26 309 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 NBEAP1P0C6P0 100 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 FAHP16930 419 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 BMI1P35226 326 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 DLX2Q07687 328 aaPredicted RBP15.86■□□□□ 0.13
SMPD1-201ENST00000342245 MALLQ13021 153 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 VAMP3Q15836 100 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 ASCL4Q6XD76 172 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 MRPL43Q8N983 215 aaKnown RBP15.86■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF721Q8TF20 911 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 SFRP2Q96HF1 295 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 MRPL18Q9H0U6 180 aaKnown RBP15.86■□□□□ 0.13
SMPD1-201ENST00000342245 PSENENQ9NZ42 101 aa15.86■□□□□ 0.13
SMPD1-201ENST00000342245 WISP1O95388 367 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 SERPINA7P05543 415 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 HINT1P49773 126 aaPredicted RBP15.85■□□□□ 0.13
SMPD1-201ENST00000342245 PRR22Q8IZ63 422 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF321PQ8N8H1 164 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 ST8SIA1Q92185 356 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 ALKBH4Q9NXW9 302 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 A0A1W2PQU0 124 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 H3BP45 60 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 PMCHL1Q16048 86 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF295-AS1Q8N0V1 137 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 SLC7A10Q9NS82 523 aa15.85■□□□□ 0.13
SMPD1-201ENST00000342245 PTPRSQ13332 1948 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 LOC102725191A0A1B0GVB3 256 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 A0A1W2PP55 124 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 DEGS1O15121 323 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 RER1O15258 196 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 SYNGR2O43760 224 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 PDCD6O75340 191 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 TOX4O94842 621 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 KITLGP21583 273 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 PSRC1Q6PGN9 363 aaPredicted RBP15.84■□□□□ 0.13
SMPD1-201ENST00000342245 SLC25A47Q6Q0C1 308 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 OR1E3Q8WZA6 343 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF160Q9HCG1 818 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 KIAA1324LA8MWY0 1029 aaPredicted RBP15.84■□□□□ 0.13
SMPD1-201ENST00000342245 GABRA2P47869 451 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 RPS18P62269 152 aaKnown RBP15.84■□□□□ 0.13
SMPD1-201ENST00000342245 CNN3Q15417 329 aaKnown RBP15.84■□□□□ 0.13
SMPD1-201ENST00000342245 HLA-DQA1Q5Y7H0 255 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 NAT6Q93015 286 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 CLN8Q9UBY8 286 aa15.84■□□□□ 0.13
SMPD1-201ENST00000342245 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 IGLC7A0M8Q6 106 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 TNFSF12O43508 249 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 NTSR1P30989 418 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 VIPR2P41587 438 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 OR10J3Q5JRS4 329 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 C1orf185Q5T7R7 199 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 ZNF818PQ6ZRF7 136 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 C19orf35Q6ZS72 473 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 TCF23Q7RTU1 214 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 LHFPL4Q7Z7J7 247 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 GAPTQ8N292 157 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 CADM4Q8NFZ8 388 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 EMC6Q9BV81 110 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 IL36GQ9NZH8 169 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 A0A0C4DFX4 3053 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 A0A1W2PRS3 328 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 VSTM2BA6NLU5 285 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 C11orf94C9JXX5 98 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 NXPH3O95157 252 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 PRRX1P54821 245 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 CLDN18P56856 261 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 PLCXD2Q0VAA5 305 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 LRRC10Q5BKY1 277 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 C1orf53Q5VUE5 145 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 OSR2Q8N2R0 312 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 OR4C12Q96R67 309 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 STRADBQ9C0K7 418 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 NRN1Q9NPD7 142 aa15.83■□□□□ 0.12
SMPD1-201ENST00000342245 TBL2Q9Y4P3 447 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms