RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ADIPOQQ15848 244 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 KRBOX4Q5JUW0 171 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 PRSS54Q6PEW0 395 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 SLC51BQ86UW2 128 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 KDF1Q8NAX2 398 aaPredicted RBP6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 OR10V1Q8NGI7 309 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 ASB13Q8WXK3 278 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 C5orf30Q96GV9 206 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 CNTNAP3BQ96NU0 1288 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 CNTNAP3Q9BZ76 1288 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 SMIM3Q9BZL3 60 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 MAGT1Q9H0U3 335 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 OR2S2Q9NQN1 319 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 CYTL1Q9NRR1 136 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 ZDHHC8Q9ULC8 765 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 UBE2J1Q9Y385 318 aaPredicted RBP6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 WIPI2Q9Y4P8 454 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 DYSFO75923 2080 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 A0A0D9SG52 128 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 KANTRA0A1W2PQU2 76 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 B8ZZF3 427 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 ACAA1P09110 424 aaPredicted RBP6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 CD80P33681 288 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 PPP1CCP36873 323 aaKnown RBP6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 CXorf66Q5JRM2 361 aaPredicted RBP6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 CLLU1Q5K131 121 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 SELENOHQ8IZQ5 122 aaKnown RBP6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 CABLES2Q9BTV7 478 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 SUCNR1Q9BXA5 334 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 DNAJB11Q9UBS4 358 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 SPEF1Q9Y4P9 236 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 RBM7Q9Y580 266 aaKnown RBP6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 YLPM1P49750 1951 aaKnown RBP6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 CACNA1BQ00975 2339 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 FAM90A27PA6NNH2 459 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 BCL2L11O43521 198 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 LHBP01229 141 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 IFNA21P01568 189 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 IGKV1-39P01597 117 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 IGKV1D-39P04432 117 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 GLAP06280 429 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 HKR1P10072 659 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 TUBG1P23258 451 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 CD200P41217 278 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF345Q14585 488 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 HMGN3Q15651 99 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 SMIM21Q3B7S5 101 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 OR2B11Q5JQS5 317 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM108Q6UXF1 575 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 Q6ZRM9 215 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 SPERTQ8NA61 448 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 ERGIC1Q969X5 290 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 PIGMQ9H3S5 423 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 RHOFQ9HBH0 211 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 TUBG2Q9NRH3 451 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 TUBD1Q9UJT1 453 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 KCNS2Q9ULS6 477 aa6.18□□□□□ -1.42
SRFBP1-201ENST00000339397 LINC00862A6NCI5 91 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 H7C1Q1 480 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 K7EPK0 472 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ADAM20O43506 726 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 DEDDO75618 318 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 B3GALNT1O75752 331 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 CDS2O95674 445 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 CTXN2P0C2S0 81 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 TNFAIP6P98066 277 aaPredicted RBP6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 BTNL3Q6UXE8 466 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 COMMD7Q86VX2 200 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 FAM90A1Q86YD7 464 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF695Q8IW36 515 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 LGI3Q8N145 548 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF808Q8N4W9 903 aaPredicted RBP6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 FAM71E2Q8N5Q1 922 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 DRAM1Q8N682 238 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 LRTM2Q8N967 370 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ANGPTL6Q8NI99 470 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 LEAP2Q969E1 77 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ARL11Q969Q4 196 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 ABHD14BQ96IU4 210 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM30CPA0ZSE6 113 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 LGALS8O00214 317 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 CCL21O00585 134 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 SIGLEC5O15389 551 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 RAMP3O60896 148 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 LYL1P12980 280 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 EPHA1P21709 976 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 PTAFRP25105 342 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 F2RP25116 425 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 MDH2P40926 338 aaKnown RBP6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 EDDM3BP56851 147 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 POLR2GP62487 172 aaKnown RBP eCLIP6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 RPL30P62888 115 aaKnown RBP6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 NHLH2Q02577 135 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 RPL7L1Q6DKI1 246 aaKnown RBP6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 CMTM1Q8IZ96 169 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 CCDC71LQ8N9Z2 235 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 BVESQ8NE79 360 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 C17orf50Q8WW18 174 aa6.17□□□□□ -1.42
SRFBP1-201ENST00000339397 GALMQ96C23 342 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms