RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CHATP28329 748 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 RPS11P62280 158 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 RIPK1Q13546 671 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 TTC23Q5W5X9 447 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 DMKNQ6E0U4 476 aaPredicted RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 SETD9Q8NE22 299 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 OR11H1Q8NG94 326 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 CCDC107Q8WV48 283 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 TMEM80Q96HE8 168 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 KCTD7Q96MP8 289 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 S100A13Q99584 98 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF184Q99676 751 aaPredicted RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 METTL9Q9H1A3 318 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 SORL1Q92673 2214 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 AIPO00170 330 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 LY86O95711 162 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 GNAO1P09471 354 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 INSL3P51460 131 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 F2RL1P55085 397 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 DOC2BQ14184 412 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 RCN1Q15293 331 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 MPV17LQ2QL34 196 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 Q3ZCU0 254 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 Q499Y3 187 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 LAIR2Q6ISS4 152 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 DHRSXQ8N5I4 330 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 PACRGLQ8N7B6 248 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 GGHQ92820 318 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF107Q9UII5 783 aaPredicted RBP12.19□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF580Q9UK33 172 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 SMAD5-AS1Q9Y6J3 95 aa12.19□□□□□ -0.46
LINC01116-202ENST00000339037 PNMA8CA0A1B0GUJ8 204 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 SLC31A2O15432 143 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 MT-ND4P03905 459 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 OR8U8P0C7N1 319 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 SLC2A2P11168 524 aaPredicted RBP12.18□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF137PP52743 207 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 ST3GAL4Q11206 333 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 SLC22A6Q4U2R8 563 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 YIF1BQ5BJH7 314 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 TMEM65Q6PI78 240 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 SLC25A48Q6ZT89 311 aaKnown RBP12.18□□□□□ -0.46
LINC01116-202ENST00000339037 STX19Q8N4C7 294 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 MYOZ3Q8TDC0 251 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 RAB9BQ9NP90 201 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 GNG12Q9UBI6 72 aa12.18□□□□□ -0.46
LINC01116-202ENST00000339037 A0A1W2PPK0 400 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 SPINT2O43291 252 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF780AO75290 641 aaPredicted RBP12.17□□□□□ -0.46
LINC01116-202ENST00000339037 GPX5O75715 221 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 FSTP19883 344 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 MMDQ15546 238 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 MUC7Q8TAX7 377 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 MUL1Q969V5 352 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 RBMXL1Q96E39 390 aaKnown RBP12.17□□□□□ -0.46
LINC01116-202ENST00000339037 UBE2E2Q96LR5 201 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 CHCHD6Q9BRQ6 235 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 C8orf4Q9NR00 106 aa12.17□□□□□ -0.46
LINC01116-202ENST00000339037 CHCHD3Q9NX63 227 aaKnown RBP12.17□□□□□ -0.46
LINC01116-202ENST00000339037 EPPK1P58107 5090 aaKnown RBP12.16□□□□□ -0.46
LINC01116-202ENST00000339037 TRBV5-7A0A0A0MS05 114 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 GTF2F2P13984 249 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 MYF6P23409 242 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF616Q08AN1 781 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 LSAMPQ13449 338 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 MED21Q13503 144 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 TMEM30BQ3MIR4 351 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 CT45A1Q5HYN5 189 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 CASC10Q5T4H9 136 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 FAM27D1Q5T7N8 215 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 AHSA2Q719I0 299 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 OR10V1Q8NGI7 309 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 OR1N2Q8NGR9 330 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 CT45A3Q8NHU0 189 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 CYYR1Q96J86 154 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 RCHY1Q96PM5 261 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 RSRP1Q9BUV0 290 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 KLK15Q9H2R5 256 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 GNB4Q9HAV0 340 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 SPACA1Q9HBV2 294 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 CKLFQ9UBR5 152 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
LINC01116-202ENST00000339037 LYSTQ99698 3801 aa12.16□□□□□ -0.46
LINC01116-202ENST00000339037 I3L521 148 aa12.15□□□□□ -0.46
LINC01116-202ENST00000339037 MAS1P04201 325 aa12.15□□□□□ -0.46
LINC01116-202ENST00000339037 PPIFP30405 207 aaKnown RBP12.15□□□□□ -0.46
LINC01116-202ENST00000339037 CAPGP40121 348 aa12.15□□□□□ -0.46
LINC01116-202ENST00000339037 VHLP40337 213 aa12.15□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF134P52741 427 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms