RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 AGAP20933 346 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 YBX1P67809 324 aaKnown RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 MEF2BQ02080 365 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 SAPCD1Q5SSQ6 148 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 Q8WTZ3 238 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TUBD1Q9UJT1 453 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TRAV39A0A0B4J263 110 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 OR4C45A6NMZ5 311 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TNFAIP6P98066 277 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 PQLC2Q6ZP29 291 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 MRGPRX1Q96LB2 322 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 HIGD1AQ9Y241 93 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 LOXL2Q9Y4K0 774 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TOPAZ1Q8N9V7 1692 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 A1L4Q6 167 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 AGFG2O95081 481 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 RPL36A-HNRNPH2H7BZ11 118 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 RBFOX2O43251 390 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 RND3P61587 244 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 SLC25A30Q5SVS4 291 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 C8orf82Q6P1X6 216 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 CCL17Q92583 94 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 C14orf144Q96I85 54 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 A0A1B0GWB2 263 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 OR2A4O95047 310 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 CA1P00915 261 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-201ENST00000334504 GLULP15104 373 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 MAS1LP35410 378 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 TEX30Q5JUR7 227 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 OR2A7Q96R45 310 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 WNT10AQ9GZT5 417 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 SH3BGRL3Q9H299 93 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 OR51B2Q9Y5P1 312 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 MRPS18BQ9Y676 258 aaKnown RBP8.57□□□□□ -1.04
COL4A6-201ENST00000334504 PPIHO43447 177 aaKnown RBP8.57□□□□□ -1.04
COL4A6-201ENST00000334504 LGALS7P47929 136 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 HERPUD1Q15011 391 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 C19orf48Q6RUI8 117 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 OR11G2Q8NGC1 345 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 GMPPAQ96IJ6 420 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-201ENST00000334504 NEU1Q99519 415 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 ZFP64Q9NPA5 681 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 CLDN16Q9Y5I7 305 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 NPIPB8E9PQR5 432 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 NPIPB7O75200 414 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 GALNSP34059 522 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 PPP1CCP36873 323 aaKnown RBP8.57□□□□□ -1.04
COL4A6-201ENST00000334504 PRSS41Q7RTY9 318 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 BIVMQ86UB2 503 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 CADM4Q8NFZ8 388 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 P2RX4Q99571 388 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 FSCN3Q9NQT6 498 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 MPC1Q9Y5U8 109 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 NUP98P52948 1817 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 MOSPD3O75425 235 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 ZNF735P0CB33 412 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 RIPPLY3P57055 190 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM252Q8N6L7 170 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 FLRT3Q9NZU0 649 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 SCN11AQ9UI33 1791 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 PRSS2P07478 247 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 CT62P0C5K7 136 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 CBLN3Q6UW01 205 aa8.57□□□□□ -1.04
COL4A6-201ENST00000334504 TFF2Q03403 129 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 C19orf54Q5BKX5 351 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 OR5R1Q8NH85 324 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 ST6GALNAC6Q969X2 333 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 SIRT4Q9Y6E7 314 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-201ENST00000334504 RNPS1Q15287 305 aaKnown RBP8.56□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM45BQ96B21 275 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 PGLYRP3Q96LB9 341 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 RAXQ9Y2V3 346 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 TRGV5A0A0B4J1U4 118 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 DPRXA6NFQ7 191 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 C1QTNF9BB2RNN3 333 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 KRTCAP3Q53RY4 240 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 SPAG8Q99932 426 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-201ENST00000334504 PLAC1Q9HBJ0 212 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 WNT16Q9UBV4 365 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 OR10AG1Q8NH19 301 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM70Q9BUB7 260 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 PLA2G3Q9NZ20 509 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 KCNE5Q9UJ90 142 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 KDM3BQ7LBC6 1761 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 GFRA1P56159 465 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 OR6X1Q8NH79 312 aa8.56□□□□□ -1.04
COL4A6-201ENST00000334504 MRPL16Q9NX20 251 aaKnown RBP8.56□□□□□ -1.04
COL4A6-201ENST00000334504 SNAI2O43623 268 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 PNLIPP16233 465 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 CCR5P51681 352 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 C2orf83Q53S99 150 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 WFDC3Q8IUB2 231 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 OR4C13Q8NGP0 309 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 ELSPBP1Q96BH3 223 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms