RNA–Protein interactions for RNA: ENST00000332175.12

PTPRM-201, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRM, Length 6,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-201ENST00000332175 IGKV1-8A0A0C4DH67 115 aa19.43■□□□□ 0.7
PTPRM-201ENST00000332175 HERVK_113P61574 105 aa19.43■□□□□ 0.7
PTPRM-201ENST00000332175 KLF9Q13886 244 aaPredicted RBP19.43■□□□□ 0.7
PTPRM-201ENST00000332175 ST6GAL2Q96JF0 529 aa19.43■□□□□ 0.7
PTPRM-201ENST00000332175 GBGT1Q8N5D6 347 aa19.43■□□□□ 0.7
PTPRM-201ENST00000332175 IER3P46695 156 aa19.43■□□□□ 0.7
PTPRM-201ENST00000332175 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.43■□□□□ 0.7
PTPRM-201ENST00000332175 SPANXN1Q5VSR9 72 aa19.43■□□□□ 0.7
PTPRM-201ENST00000332175 TMEM91Q6ZNR0 172 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 GHITMQ9H3K2 345 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 CISD1Q9NZ45 108 aaKnown RBP19.42■□□□□ 0.7
PTPRM-201ENST00000332175 CACNA1CQ13936 2221 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 CYB5R3P00387 301 aaPredicted RBP19.42■□□□□ 0.7
PTPRM-201ENST00000332175 FCGR3AP08637 254 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 METTL1Q9UBP6 276 aaKnown RBP19.42■□□□□ 0.7
PTPRM-201ENST00000332175 FUT9Q9Y231 359 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 HBZP02008 142 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 GUCD1Q96NT3 240 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 GPX7Q96SL4 187 aaPredicted RBP19.42■□□□□ 0.7
PTPRM-201ENST00000332175 PRDM14Q9GZV8 571 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 IGKV3D-15A0A087WSY6 115 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 EPOPA6NHQ4 379 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 HAX1O00165 279 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 SMPD2O60906 423 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 IGKV3-15P01624 115 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 PF4V1P10720 104 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 CEACAM21Q3KPI0 293 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 OVCH2Q7RTZ1 564 aa19.42■□□□□ 0.7
PTPRM-201ENST00000332175 ELOBQ15370 118 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 LYRM2Q9NU23 88 aaPredicted RBP19.41■□□□□ 0.7
PTPRM-201ENST00000332175 TRBV5-3A0A0A0MS03 114 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 PTP4A3O75365 173 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 TWIST1Q15672 202 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 KRTCAP3Q53RY4 240 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 SLC25A45Q8N413 288 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 ZBTB34Q8NCN2 500 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 PAXXQ9BUH6 204 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 PDE6DO43924 150 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 APCSP02743 223 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 RCC1P18754 421 aaPredicted RBP19.41■□□□□ 0.7
PTPRM-201ENST00000332175 HCP5Q6MZN7 132 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 CYB5R1Q9UHQ9 305 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 ID4P47928 161 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 HOGA1Q86XE5 327 aa19.41■□□□□ 0.7
PTPRM-201ENST00000332175 DOCK5Q9H7D0 1870 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 HSF4Q9ULV5 492 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 SF3B6Q9Y3B4 125 aaKnown RBP19.4■□□□□ 0.7
PTPRM-201ENST00000332175 MUC15Q8N387 334 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 SNX22Q96L94 193 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 FOCADQ5VW36 1801 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 OR2H2O95918 312 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 DHRS7CA6NNS2 312 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 ASAH2BP0C7U1 165 aa19.4■□□□□ 0.7
PTPRM-201ENST00000332175 PNRC1Q12796 327 aaPredicted RBP19.4■□□□□ 0.7
PTPRM-201ENST00000332175 CLDN18P56856 261 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 FAM27BQ5VT28 67 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 MYOZ3Q8TDC0 251 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 ZP4Q12836 540 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 C8orf82Q6P1X6 216 aaPredicted RBP19.39■□□□□ 0.69
PTPRM-201ENST00000332175 CBLN2Q8IUK8 224 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 OR4C46A6NHA9 309 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 PGA4P0DJD7 388 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 MMP16P51512 607 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 RAB33BQ9H082 229 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 SIRT4Q9Y6E7 314 aaPredicted RBP19.39■□□□□ 0.69
PTPRM-201ENST00000332175 HPRT1P00492 218 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 SLC16A13Q7RTY0 426 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 TRPM6Q9BX84 2022 aa19.39■□□□□ 0.69
PTPRM-201ENST00000332175 CIDEAO60543 219 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 LY6EQ16553 131 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 C16orf92Q96LL3 132 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 ANGPTL4Q9BY76 406 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 TMEM191AQ9H0A3 160 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 GAPDHP04406 335 aaKnown RBP19.38■□□□□ 0.69
PTPRM-201ENST00000332175 CDCP2Q5VXM1 449 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 PLAUP00749 431 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 SLC25A53Q5H9E4 307 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 PRR33A8MZF0 331 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 SNURFLB1AK76 121 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 H3BVH4 76 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 TSPAN2O60636 221 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 FAM106CPP0CH98 169 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 RBM38Q9H0Z9 239 aaKnown RBP19.38■□□□□ 0.69
PTPRM-201ENST00000332175 CA11O75493 328 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 SCTP09683 121 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 SP9P0CG40 484 aa19.38■□□□□ 0.69
PTPRM-201ENST00000332175 CEACAM18A8MTB9 384 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 LMX1BO60663 402 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 NUBP1P53384 320 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 SRSF9Q13242 221 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTPRM-201ENST00000332175 PRSS27Q9BQR3 290 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 DDA1Q9BW61 102 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 IL36RNQ9UBH0 155 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 IL17BQ9UHF5 180 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 HIST1H1BP16401 226 aaKnown RBP19.37■□□□□ 0.69
PTPRM-201ENST00000332175 POM121Q96HA1 1249 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 PRDM6Q9NQX0 595 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 PLXNB2O15031 1838 aa19.37■□□□□ 0.69
PTPRM-201ENST00000332175 IGHV3OR16-10A0A075B7F0 116 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms