RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TTTY12Q9BZ98 90 aa13.06□□□□□ -0.32
BRCC3-201ENST00000330045 PRRC2CQ9Y520 2896 aaKnown RBP13.06□□□□□ -0.32
BRCC3-201ENST00000330045 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
BRCC3-201ENST00000330045 APLNRP35414 380 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 EIF2S3P41091 472 aaKnown RBP13.05□□□□□ -0.32
BRCC3-201ENST00000330045 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
BRCC3-201ENST00000330045 IZUMO4Q1ZYL8 232 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 KHDC3LQ587J8 217 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 P4HA3Q7Z4N8 544 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 OR10V1Q8NGI7 309 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 OR51B6Q9H340 312 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 SPAARA0A1B0GVQ0 90 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 CLN5O75503 358 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 WNT5AP41221 380 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 OR1C1Q15619 314 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 Q6ZRM9 215 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 NUFIP2Q7Z417 695 aaKnown RBP13.05□□□□□ -0.32
BRCC3-201ENST00000330045 GSN-AS1Q9NRJ2 163 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 OR1A1Q9P1Q5 309 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 IL17BQ9UHF5 180 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 MED13Q9UHV7 2174 aa13.05□□□□□ -0.32
BRCC3-201ENST00000330045 ZNF407Q9C0G0 2248 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 ARGFXA6NJG6 315 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 DEGS1O15121 323 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 RHBDL1O75783 438 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
BRCC3-201ENST00000330045 TMEM251Q8N6I4 163 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 PKIBQ9C010 78 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 TRAV1-1A0A0B4J248 108 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 TNFSF15O95150 251 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 WNT2P09544 360 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 CA6P23280 308 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 TCF15Q12870 199 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 NCMAPQ5T1S8 102 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 MCEMP1Q8IX19 187 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 DDA1Q9BW61 102 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 OR51I2Q9H344 312 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 PLA2G3Q9NZ20 509 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 ABI3Q9P2A4 366 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 CACNG5Q9UF02 275 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 BOD1L1Q8NFC6 3051 aa13.04□□□□□ -0.32
BRCC3-201ENST00000330045 LRP5LA4QPB2 252 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 LINC00587B1AMM8 73 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 IGKV1-39P01597 117 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 IGKV1D-39P04432 117 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 PLGLB1Q02325 96 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 CLN3Q13286 438 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 KIAA0141Q14154 515 aaPredicted RBP13.03□□□□□ -0.32
BRCC3-201ENST00000330045 ELOBQ15370 118 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 SCGB1C1Q8TD33 95 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 Q8WTZ3 238 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
BRCC3-201ENST00000330045 LOC102723971A0A1B0GUV8 181 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 SYNGR2O43760 224 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 IGLV2-14P01704 120 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 C3AR1Q16581 482 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 ATP1A1-AS1Q5TC04 95 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 Q6P435 159 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 RSG1Q9BU20 258 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 TMPRSS5Q9H3S3 457 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 SIRT7Q9NRC8 400 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 GNG13Q9P2W3 67 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 PRSS50Q9UI38 385 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 PPP1R3CQ9UQK1 317 aa13.03□□□□□ -0.32
BRCC3-201ENST00000330045 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 CXorf65A6NEN9 183 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.32
BRCC3-201ENST00000330045 J3QT63 122 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 PPIHO43447 177 aaKnown RBP13.02□□□□□ -0.32
BRCC3-201ENST00000330045 IAPPP10997 89 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 TESK1Q15569 626 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 IGFBP7Q16270 282 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 OR51M1Q9H341 326 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 RPRMQ9NS64 109 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 PSENENQ9NZ42 101 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 RBM7Q9Y580 266 aaKnown RBP13.02□□□□□ -0.32
BRCC3-201ENST00000330045 URGCP-MRPS24S4R325 110 aa13.02□□□□□ -0.32
BRCC3-201ENST00000330045 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.33
BRCC3-201ENST00000330045 CXCL1P09341 107 aa13.02□□□□□ -0.33
BRCC3-201ENST00000330045 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.33
BRCC3-201ENST00000330045 PRSS33Q8NF86 280 aa13.02□□□□□ -0.33
BRCC3-201ENST00000330045 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
BRCC3-201ENST00000330045 C12orf49Q9H741 205 aa13.02□□□□□ -0.33
BRCC3-201ENST00000330045 ATXN7O15265 892 aaPredicted RBP13.01□□□□□ -0.33
BRCC3-201ENST00000330045 METTL15P1P0C7V9 234 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 HOXA5P20719 270 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 MDH2P40926 338 aaKnown RBP13.01□□□□□ -0.33
BRCC3-201ENST00000330045 GLIPR1P48060 266 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 ERVFRD-1P60508 538 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF674Q2M3X9 581 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms