RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 UBE2V1Q13404 147 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 FAM78BQ5VT40 261 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 LRP11Q86VZ4 500 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 OR4B1Q8NGF8 309 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 OR5P3Q8WZ94 311 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 TAF15Q92804 592 aaKnown RBP eCLIP6.65□□□□□ -1.34
CD46-201ENST00000322875 CHRNA10Q9GZZ6 450 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 WIPI2Q9Y4P8 454 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 A8MXE2 369 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 PGLYRP1O75594 196 aaPredicted RBP6.65□□□□□ -1.34
CD46-201ENST00000322875 OPN1LWP04000 364 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 CRYGSP22914 178 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 MPLP40238 635 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 Q0VG73 95 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 RSPO4Q2I0M5 234 aaPredicted RBP6.65□□□□□ -1.34
CD46-201ENST00000322875 KRTAP27-1Q3LI81 207 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 CST9LP1Q5W188 147 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 HLA-DQA1Q5Y7H0 255 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 ACSM6Q6P461 480 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 LHFPL2Q6ZUX7 228 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 GJC3Q8NFK1 279 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 EXTL1Q92935 676 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 CIB3Q96Q77 187 aaPredicted RBP6.65□□□□□ -1.34
CD46-201ENST00000322875 OR4C12Q96R67 309 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 CHODLQ9H9P2 273 aa6.65□□□□□ -1.34
CD46-201ENST00000322875 NCOA6Q14686 2063 aaPredicted RBP6.65□□□□□ -1.35
CD46-201ENST00000322875 IGKV1-6A0A0C4DH72 117 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 A0A0U1RQK1 487 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 CTXND1A0A1B0GTU2 59 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 ZNF320A2RRD8 509 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 C2orf72A6NCS6 295 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 VSTM2BA6NLU5 285 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 SHISA8B8ZZ34 492 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 NXPH2O95156 264 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 PDGFBP01127 241 aaPredicted RBP6.65□□□□□ -1.35
CD46-201ENST00000322875 IGKV1-39P01597 117 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 IGKV1D-39P04432 117 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 PPP1CBP62140 327 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 SHBQ15464 509 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 MRGPRDQ8TDS7 321 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.65□□□□□ -1.35
CD46-201ENST00000322875 OXGR1Q96P68 337 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 ZNF703Q9H7S9 590 aaPredicted RBP6.65□□□□□ -1.35
CD46-201ENST00000322875 SLC39A9Q9NUM3 307 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 ST3GAL6Q9Y274 331 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 PPIAL4AQ9Y536 164 aa6.65□□□□□ -1.35
CD46-201ENST00000322875 IGLV3-32A0A0A0MS00 114 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 F5H5K5 113 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 H3BML4 177 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 SYNGR2O43760 224 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 SERF1AO75920 110 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 IGLC2P0DOY2 106 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 MSR1P21757 451 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 F2RP25116 425 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 TNFRSF4P43489 277 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 OR1D5P58170 312 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 PLPPR5Q32ZL2 321 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 PHYHD1Q5SRE7 291 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.64□□□□□ -1.35
CD46-201ENST00000322875 C1orf174Q8IYL3 243 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 TMEM54Q969K7 222 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 LSM10Q969L4 123 aaKnown RBP6.64□□□□□ -1.35
CD46-201ENST00000322875 NEIL1Q96FI4 390 aaPredicted RBP6.64□□□□□ -1.35
CD46-201ENST00000322875 TECTBQ96PL2 329 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 HSPB9Q9BQS6 159 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 RBM24Q9BX46 236 aaKnown RBP6.64□□□□□ -1.35
CD46-201ENST00000322875 PLA2G2FQ9BZM2 168 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 CCL28Q9NRJ3 127 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 C1QTNF9BB2RNN3 333 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 F6UZH7 168 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 M0R135 149 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 CNOT4O95628 575 aaKnown RBP6.64□□□□□ -1.35
CD46-201ENST00000322875 TNFP01375 233 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 OR5G3P0C626 314 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 MALLQ13021 153 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 CNN3Q15417 329 aaKnown RBP6.64□□□□□ -1.35
CD46-201ENST00000322875 RAB30Q15771 203 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 TMEM249Q2WGJ8 235 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 CARD17Q5XLA6 110 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 SLC25A24Q6NUK1 477 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 TCF23Q7RTU1 214 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 OR4F5Q8NH21 305 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 ZNF799Q96GE5 643 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 OR4F4Q96R69 305 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 ZPBPQ9BS86 351 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 IL23AQ9NPF7 189 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 FBXL7Q9UJT9 491 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 DOCK8Q8NF50 2099 aa6.64□□□□□ -1.35
CD46-201ENST00000322875 TRAV9-1A0A075B6T8 112 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 IGHV2-70DA0A0C4DH43 119 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 GRIFINA4D1Z8 144 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A10PA6NDY2 464 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A18PA6NE21 464 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A16PA6NEW6 464 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A20PA6NIJ5 464 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A8PA6NJQ4 464 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A7PA6NKC0 464 aa6.63□□□□□ -1.35
CD46-201ENST00000322875 FAM90A22PA8MWA6 464 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms