RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 HIPK2Q9H2X6 1198 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 SAV1Q9H4B6 383 aaPredicted RBP18.88■□□□□ 0.61
PNKP-201ENST00000322344 TUBA4BQ9H853 241 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 RPS10P5Q9NQ39 176 aa18.88■□□□□ 0.61
PNKP-201ENST00000322344 KLF2Q9Y5W3 355 aaPredicted RBP18.88■□□□□ 0.61
PNKP-201ENST00000322344 CRYBA1P05813 215 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 MPV17P39210 176 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 CEACAM6P40199 344 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 KIR2DL2P43627 348 aaPredicted RBP18.87■□□□□ 0.61
PNKP-201ENST00000322344 TAS2R30P59541 319 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 AWAT1Q58HT5 328 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 AKR1C8PQ5T2L2 129 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 ZBTB34Q8NCN2 500 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 CXXC4Q9H2H0 198 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 CACNG5Q9UF02 275 aa18.87■□□□□ 0.61
PNKP-201ENST00000322344 H0YL77 283 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 IFNA5P01569 189 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 FTH1P19P0C7X4 201 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 SPSB3Q6PJ21 355 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 WDR31Q8NA23 367 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 EGLN1Q9GZT9 426 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 ASCL3Q9NQ33 180 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 KIAA1456Q9P272 454 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 C7orf77A4D0Y5 90 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 PRR33A8MZF0 331 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 SYNGR2O43760 224 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 RAB2AP61019 212 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 RHEBQ15382 184 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 SLC35E4Q6ICL7 350 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 UNKLQ9H9P5 680 aaKnown RBP18.86■□□□□ 0.61
PNKP-201ENST00000322344 BIN3Q9NQY0 253 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 TINAGQ9UJW2 476 aa18.86■□□□□ 0.61
PNKP-201ENST00000322344 MED19A0JLT2 244 aaPredicted RBP18.85■□□□□ 0.61
PNKP-201ENST00000322344 RBFOX3A6NFN3 312 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 C1QTNF9BB2RNN3 333 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 IGKV1-5P01602 117 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 TLE4Q04727 773 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 ZNF585BQ52M93 769 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 AKIRIN2Q53H80 203 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 Q6ZRM9 215 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 ZNF295-AS1Q8N0V1 137 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 DRAM1Q8N682 238 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 DEFB124Q8NES8 71 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 OR14J1Q9UGF5 321 aa18.85■□□□□ 0.61
PNKP-201ENST00000322344 M0R036 132 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 HBE1P02100 147 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 C9orf106Q8NAJ2 232 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 RFNGQ9Y644 331 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 MED12LQ86YW9 2145 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 GPR37O15354 613 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 MLNRO43193 412 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 WDR1O75083 606 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 SNRNP70P08621 437 aaKnown RBP18.84■□□□□ 0.61
PNKP-201ENST00000322344 KITLGP21583 273 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 SP5Q6BEB4 398 aaPredicted RBP18.84■□□□□ 0.61
PNKP-201ENST00000322344 PRR7Q8TB68 274 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 GALMQ96C23 342 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 C14orf79Q96F83 325 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 CLCC1Q96S66 551 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 ABHD14AQ9BUJ0 271 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 BCL2L14Q9BZR8 327 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 ESPL1Q14674 2120 aa18.84■□□□□ 0.61
PNKP-201ENST00000322344 OOEPA6NGQ2 149 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 FAM90A26D6RGX4 464 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 GALR2O43603 387 aaPredicted RBP18.83■□□□□ 0.61
PNKP-201ENST00000322344 ZNF16P17020 682 aaPredicted RBP18.83■□□□□ 0.61
PNKP-201ENST00000322344 VWA1Q6PCB0 445 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 C11orf53Q8IXP5 236 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 C1orf174Q8IYL3 243 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 ZNF645Q8N7E2 425 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 RBMXL1Q96E39 390 aaKnown RBP18.83■□□□□ 0.61
PNKP-201ENST00000322344 TOLLIPQ9H0E2 274 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 COA4Q9NYJ1 87 aa18.83■□□□□ 0.61
PNKP-201ENST00000322344 NCOR1O75376 2440 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 A0A1B0GV50 99 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 PSPNO60542 156 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 AGFG2O95081 481 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 RUNX1Q01196 453 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 SRSF6Q13247 344 aaKnown RBP18.83■□□□□ 0.6
PNKP-201ENST00000322344 MSMO1Q15800 293 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 RNF212Q495C1 297 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 SOHLH1Q5JUK2 328 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 SLC25A24Q6NUK1 477 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 ETV3LQ6ZN32 361 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 CD300LFQ8TDQ1 290 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 PLSCR4Q9NRQ2 329 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 PSENENQ9NZ42 101 aa18.83■□□□□ 0.6
PNKP-201ENST00000322344 MT-ND4LP03901 98 aa18.82■□□□□ 0.6
PNKP-201ENST00000322344 HOXA1P49639 335 aaPredicted RBP18.82■□□□□ 0.6
PNKP-201ENST00000322344 CCL20P78556 96 aa18.82■□□□□ 0.6
PNKP-201ENST00000322344 UBALD1Q8TB05 177 aa18.82■□□□□ 0.6
PNKP-201ENST00000322344 IGHV3-64DA0A0J9YX35 117 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 H3BP45 60 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 TIMM8AO60220 97 aaPredicted RBP18.81■□□□□ 0.6
PNKP-201ENST00000322344 OR13C7P0DN81 318 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 RAB5BP61020 215 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 TMEM267Q0VDI3 215 aaPredicted RBP18.81■□□□□ 0.6
PNKP-201ENST00000322344 IZUMO4Q1ZYL8 232 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 ACP7Q6ZNF0 438 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 LINC00518Q8N0U6 118 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms