RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ZNF320A2RRD8 509 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 MFNGO00587 321 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SMIM17P0DL12 118 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SULT1A3P0DMM9 295 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SULT1A4P0DMN0 295 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 COL10A1Q03692 680 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 MMDQ15546 238 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SRSF7Q16629 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 Q3ZCU0 254 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM106AQ4KMX7 169 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 CST9LP1Q5W188 147 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 BTF3L4Q96K17 158 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 PRNDQ9UKY0 176 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 ST8SIA3O43173 380 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 PDCD1Q15116 288 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 FCN2Q15485 313 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 CLEC12BQ2HXU8 276 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 MBNL2Q5VZF2 373 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 RNF2Q99496 336 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SOCS1O15524 211 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 IGKV3-15P01624 115 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 MPZP25189 248 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 RAB4BP61018 213 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 CCL13Q99616 98 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SLX1AQ9BQ83 275 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 TMEM106BQ9NUM4 274 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 IGHV3OR15-7A0A075B7D8 119 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 RPA2P15927 270 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 OPRK1P41145 380 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF816Q0VGE8 651 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 LILRB4Q8NHJ6 448 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 PFDN5Q99471 154 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 SLC25A15Q9Y619 301 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 DUS4LO95620 317 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 ACAA1P09110 424 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 IAH1Q2TAA2 248 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 CALHM1Q8IU99 346 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 WDR31Q8NA23 367 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 SLC25A28Q96A46 364 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 CLEC7AQ9BXN2 247 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 POFUT1Q9H488 388 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 TUBA4BQ9H853 241 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 LDLRAD4O15165 306 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 CHATP28329 748 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 COMPP49747 757 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 RHOBP62745 196 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 ECSCRQ19T08 205 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 C6orf201Q7Z4U5 140 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 Q8WTZ3 238 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 RTN4IP1Q8WWV3 396 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 OR2D2Q9H210 308 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 PATZ1Q9HBE1 687 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 HTTP42858 3142 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 BCL3P20749 454 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 CD200P41217 278 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 HLA-DRB3P79483 266 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 ASCL4Q6XD76 172 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 POC1AQ8NBT0 407 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 OR1L4Q8NGR5 311 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 MS4A3Q96HJ5 214 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 HSD17B10Q99714 261 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 FAAP24Q9BTP7 215 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 TINAGL1Q9GZM7 467 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 UBQLN2Q9UHD9 624 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 TMED3Q9Y3Q3 217 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 IGLV3-1P01715 115 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 EFNB2P52799 333 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 UCP3P55916 312 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 BPIFCQ8NFQ6 507 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 CHRDL1Q9BU40 450 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 MFFQ9GZY8 342 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 OPN4Q9UHM6 478 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 BDP1A6H8Y1 2624 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 RFPL4AA6NLU0 287 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 DEFB108AA8MXU0 73 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 RFPL4AL1F8VTS6 287 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 RAB29O14966 203 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 GNG7O60262 68 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 IGHV3-13P01766 116 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 S100A2P29034 98 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 LOXL3P58215 753 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 SRSF6Q13247 344 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 HLXQ14774 488 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 OR8G2PQ6IF36 304 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 TMEM104Q8NE00 496 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 OR13C8Q8NGS7 320 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 PRSS22Q9GZN4 317 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 ARV1Q9H2C2 271 aa7.3□□□□□ -1.24
PDLIM5-201ENST00000317968 TRAV20A0A0B4J274 112 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 GEMIN2O14893 280 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 CD37P11049 281 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF14P17017 642 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 WT1P19544 449 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 GUCA2BQ16661 112 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 C15orf54Q8N8G6 183 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms