RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.86
SCFD1-201ENST00000311943 OR2S2Q9NQN1 319 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 GNG12Q9UBI6 72 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 F2RL2O00254 374 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 ORC5O43913 435 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 CRYBA1P05813 215 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 COMPP49747 757 aaPredicted RBP9.65□□□□□ -0.87
SCFD1-201ENST00000311943 OR52W1Q6IF63 320 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 DRAM1Q8N682 238 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 C3orf56Q8N813 242 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 OR13F1Q8NGS4 319 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 URM1Q9BTM9 101 aaKnown RBP9.65□□□□□ -0.87
SCFD1-201ENST00000311943 RAB22AQ9UL26 194 aa9.65□□□□□ -0.87
SCFD1-201ENST00000311943 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 VWFP04275 2813 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 MFNGO00587 321 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 AMY1AP04745 511 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 AMY2AP04746 511 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 OR3A3P47888 321 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 HMGN3Q15651 99 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 MORN2Q502X0 79 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 IGSF11Q5DX21 431 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-201ENST00000311943 ODF3L1Q8IXM7 274 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 OR10R2Q8NGX6 335 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 ZNF596Q8TC21 504 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 CFHR4Q92496 578 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 RAB3CQ96E17 227 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 RITA1Q96K30 269 aa9.64□□□□□ -0.87
SCFD1-201ENST00000311943 LEUTXA8MZ59 168 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 ST8SIA5O15466 376 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 MINOS1Q5TGZ0 78 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 GPR107Q5VW38 600 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 ZNF880Q6PDB4 577 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 C10orf99Q6UWK7 81 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 OR10X1Q8NGY0 326 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 NUDCD2Q8WVJ2 157 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 TOMM40LQ969M1 308 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 ABHD14BQ96IU4 210 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 CMSS1Q9BQ75 279 aaKnown RBP9.63□□□□□ -0.87
SCFD1-201ENST00000311943 Q9N2K0 584 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 MINOS1-NBL1R4GNA1 71 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 BTBD17A6NE02 478 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 TMEM235A6NFC5 223 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 J3QRK9 145 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 SNRNP70P08621 437 aaKnown RBP9.63□□□□□ -0.87
SCFD1-201ENST00000311943 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 PRRX1P54821 245 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 FOXL1Q12952 345 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 LYG1Q8N1E2 194 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 CAPSLQ8WWF8 208 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 ST6GALNAC6Q969X2 333 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 RPEQ96AT9 228 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 ZNF702PQ9H963 129 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 SLC23A1Q9UHI7 598 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 RNF150Q9ULK6 438 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 RNF114Q9Y508 228 aa9.63□□□□□ -0.87
SCFD1-201ENST00000311943 LINC01548A6NM66 108 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 HSD17B6O14756 317 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 SPINT2O43291 252 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 SSX5O60225 188 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 PROP1O75360 226 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
SCFD1-201ENST00000311943 PSMD7P51665 324 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 PROK1P58294 105 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 CTF1Q16619 201 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 CDNFQ49AH0 187 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 RPL39P5Q59GN2 51 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 TPRA1Q86W33 373 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 OR56B1Q8NGI3 324 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 OR5R1Q8NH85 324 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 ABCB10Q9NRK6 738 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 HSF4Q9ULV5 492 aa9.62□□□□□ -0.87
SCFD1-201ENST00000311943 IGHV1-3A0A0C4DH29 117 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 MEIS3P1A6NDR6 274 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 FCGR3AP08637 254 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 SERPINB10P48595 397 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 C6orf183Q5T699 404 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 GLDNQ6ZMI3 551 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-201ENST00000311943 SLC25A48Q6ZT89 311 aaKnown RBP9.61□□□□□ -0.87
SCFD1-201ENST00000311943 MOB3BQ86TA1 216 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 DRAXINQ8NBI3 349 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-201ENST00000311943 WFDC12Q8WWY7 111 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 C12orf4Q9NQ89 552 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 LINC00527Q9UJ94 153 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 CLPSL1A2RUU4 121 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 IGKV1D-33P01593 117 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 IGKV1-33P01594 117 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 GLAP06280 429 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 ABCA11PQ4W5N1 156 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 GDPGP1Q6ZNW5 385 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 GVQW1Q8N7I0 195 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 RTN4IP1Q8WWV3 396 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-201ENST00000311943 GALMQ96C23 342 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 IFI27L2Q9H2X8 130 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 SERTAD4Q9NUC0 356 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 RHBDL2Q9NX52 303 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms