RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 OR3A1P47881 315 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 FAM3AP98173 230 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 CT55Q8WUE5 264 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 MYOZ1Q9NP98 299 aaPredicted RBP12.1□□□□□ -0.47
SDC2-201ENST00000302190 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 ZIC3O60481 467 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 CHRNA7P36544 502 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 PSMB3P49720 205 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 GNG3P63215 75 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 CARFQ8N187 725 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 ZNF610Q8N9Z0 462 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 IGHV1-45A0A0A0MS14 117 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 SEC11BP0C7V7 166 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 ZNF25P17030 456 aaPredicted RBP12.09□□□□□ -0.47
SDC2-201ENST00000302190 FOXG1P55316 489 aaPredicted RBP12.09□□□□□ -0.47
SDC2-201ENST00000302190 TBC1D28Q2M2D7 210 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 TRIB1Q96RU8 372 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 TMEM204Q9BSN7 226 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 SPINK4O60575 86 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 CATR1Q13166 79 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 RNF122Q9H9V4 155 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 MAP1LC3B2A6NCE7 125 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 HIST1H1BP16401 226 aaKnown RBP12.09□□□□□ -0.47
SDC2-201ENST00000302190 ERVK-16P61578 105 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 TMEM187Q14656 261 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 MAP1LC3BQ9GZQ8 125 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
SDC2-201ENST00000302190 TRGC2P03986 189 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 CST2P09228 141 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 SP9P0CG40 484 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 RND3P61587 244 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 CCL20P78556 96 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 WDR25Q64LD2 544 aaPredicted RBP12.08□□□□□ -0.47
SDC2-201ENST00000302190 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 WNT5BQ9H1J7 359 aa12.08□□□□□ -0.47
SDC2-201ENST00000302190 ZNF552Q9H707 407 aaPredicted RBP12.08□□□□□ -0.47
SDC2-201ENST00000302190 PLCE1Q9P212 2302 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 PROB1E7EW31 1015 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 TNFSF15O95150 251 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 DTYMKP23919 212 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 SNCAP37840 140 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 PRAMEF5Q5TYX0 476 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 PRAMEF6Q5VXH4 476 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 NCR3LG1Q68D85 454 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 SAP25Q8TEE9 199 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 FAM210BQ96KR6 192 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 OR2D2Q9H210 308 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 PLEKHA3Q9HB20 300 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 POMT1Q9Y6A1 747 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 ATMQ13315 3056 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 IGKV1-12A0A0C4DH73 117 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 TRDCB7Z8K6 153 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 DVL1O14640 695 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 IGKV1D-12P01611 117 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 ZNF17P17021 662 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 ZNF66Q6ZN08 573 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 ZNF826PQ6ZT77 177 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
SDC2-201ENST00000302190 IGSF23A1L1A6 192 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 KLRC4-KLRK1H3BQV0 150 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 TOX3O15405 576 aaPredicted RBP12.07□□□□□ -0.48
SDC2-201ENST00000302190 COX6A1P12074 109 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 FGF7P21781 194 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 MSL2Q9HCI7 577 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 SH2D1BO14796 132 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 SYNGR2O43760 224 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 IGHV2-5P01817 119 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 SNRPCP09234 159 aaKnown RBP12.07□□□□□ -0.48
SDC2-201ENST00000302190 CDX1P47902 265 aaPredicted RBP12.07□□□□□ -0.48
SDC2-201ENST00000302190 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
SDC2-201ENST00000302190 UNQ6494/PRO21346Q6UXR6 183 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 ANGPTL4Q9BY76 406 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 PSG11Q9UQ72 335 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 SLC22A20A6NK97 555 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 C10orf142B7Z368 130 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 AQP7O14520 342 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 AGFG2O95081 481 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 G6PCP35575 357 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 QRFPP83859 136 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 SPEM2Q0P670 501 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 OR2J1Q9GZK6 312 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 DOK5Q9P104 306 aa12.07□□□□□ -0.48
SDC2-201ENST00000302190 IGKV1-27A0A075B6S5 117 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 TDGF1P13385 188 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 RAB4AP20338 218 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 MPLP40238 635 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 SLC38A11Q08AI6 406 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 ATP1A1-AS1Q5TC04 95 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 FAM185AQ8N0U4 392 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 WFDC1Q9HC57 220 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms