RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 AMMECR1Q9Y4X0 333 aaPredicted RBP10.76□□□□□ -0.69
VPS28-201ENST00000292510 TRBV6-6A0A0A6YYG2 114 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 MFNGO00587 321 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 TFAP2AP05549 437 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 PPP1CCP36873 323 aaKnown RBP10.75□□□□□ -0.69
VPS28-201ENST00000292510 CEACAM3P40198 252 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 ALDH3B2P48448 385 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 SERPINB10P48595 397 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 COMPP49747 757 aaPredicted RBP10.75□□□□□ -0.69
VPS28-201ENST00000292510 RAG2P55895 527 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 FOXL1Q12952 345 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 DHRS7BQ6IAN0 325 aaPredicted RBP10.75□□□□□ -0.69
VPS28-201ENST00000292510 ZNF554Q86TJ5 538 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 ZNF439Q8NDP4 499 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 IL1F10Q8WWZ1 152 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 TOMM40LQ969M1 308 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 RPEQ96AT9 228 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 CREB3L1Q96BA8 519 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 SLC25A38Q96DW6 304 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
VPS28-201ENST00000292510 Q9N2K0 584 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 RAB9BQ9NP90 201 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 C12orf4Q9NQ89 552 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 TCF19Q9Y242 345 aa10.75□□□□□ -0.69
VPS28-201ENST00000292510 A6NDX4 124 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 CD3GP09693 182 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 REG1BP48304 166 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 DYNLT3P51808 116 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 MADCAM1Q13477 382 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 MORN2Q502X0 79 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 CT45A1Q5HYN5 189 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 GPR107Q5VW38 600 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 Q6ZSV7 163 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 LINC00311Q8N616 119 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 CT45A3Q8NHU0 189 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 MAFIPQ8WZ33 124 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 GALMQ96C23 342 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 RHBDL2Q9NX52 303 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 ABRACLQ9P1F3 81 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 JPT1Q9UK76 154 aa10.74□□□□□ -0.69
VPS28-201ENST00000292510 GABARAPO95166 117 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 NDUFA7O95182 113 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 FCGR3AP08637 254 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 SCTP09683 121 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 RPL15P61313 204 aaKnown RBP10.73□□□□□ -0.69
VPS28-201ENST00000292510 HLA-DRB3P79483 266 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 MRPS15P82914 257 aaKnown RBP10.73□□□□□ -0.69
VPS28-201ENST00000292510 HTD2P86397 168 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 CTF1Q16619 201 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 Q3ZCU0 254 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 CDNFQ49AH0 187 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 SLC25A48Q6ZT89 311 aaKnown RBP10.73□□□□□ -0.69
VPS28-201ENST00000292510 GPR141Q7Z602 305 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 ANKRD13BQ86YJ7 626 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 IZUMO1Q8IYV9 350 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 C8orf31Q8N9H6 132 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 OCSTAMPQ9BR26 566 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 PARP12Q9H0J9 701 aaKnown RBP10.73□□□□□ -0.69
VPS28-201ENST00000292510 OR1A1Q9P1Q5 309 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 ZNF230Q9UIE0 474 aaPredicted RBP10.73□□□□□ -0.69
VPS28-201ENST00000292510 ETV7Q9Y603 341 aa10.73□□□□□ -0.69
VPS28-201ENST00000292510 IGKV1-6A0A0C4DH72 117 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 A0A1W2PPI3 338 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 TMEM235A6NFC5 223 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 SERPINE3A8MV23 424 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 OOSP1A8MZH6 123 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 HSD17B6O14756 317 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 TIMM23O14925 209 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 YPEL1O60688 119 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 BRS3P32247 399 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 MNDAP41218 407 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 SCAND1P57086 179 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 ARFRP1Q13795 201 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 DRAM1Q8N682 238 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 OR4F5Q8NH21 305 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 OR56B4Q8NH76 319 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 LINC01006Q8NI28 216 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 CAPSLQ8WWF8 208 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 SLC25A46Q96AG3 418 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 RBMXL1Q96E39 390 aaKnown RBP10.72□□□□□ -0.69
VPS28-201ENST00000292510 YPEL2Q96QA6 119 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 ABHD14AQ9BUJ0 271 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 SLC23A1Q9UHI7 598 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 SPATA2Q9UM82 520 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 SIGLEC9Q9Y336 463 aa10.72□□□□□ -0.69
VPS28-201ENST00000292510 IGHV3-72A0A0B4J1Y9 119 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 TRDCB7Z8K6 153 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 TSPAN9O75954 239 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 RAB7AP51149 207 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 ARHGDIBP52566 201 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 ZNF816Q0VGE8 651 aaPredicted RBP10.71□□□□□ -0.69
VPS28-201ENST00000292510 HERPUD1Q15011 391 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 HACD4Q5VWC8 232 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 CCDC144NLQ6NUI1 221 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 LIAT1Q6ZQX7 453 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 MOB3BQ86TA1 216 aa10.71□□□□□ -0.69
VPS28-201ENST00000292510 CROCCP3Q8IVE0 287 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms