RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 ZNF137PP52743 207 aa10□□□□□ -0.81
CD44-203ENST00000278386 F2RL1P55085 397 aa10□□□□□ -0.81
CD44-203ENST00000278386 TAS2R43P59537 309 aa10□□□□□ -0.81
CD44-203ENST00000278386 LSAMPQ13449 338 aa10□□□□□ -0.81
CD44-203ENST00000278386 SETD9Q8NE22 299 aa10□□□□□ -0.81
CD44-203ENST00000278386 C4orf3Q8WVX3 66 aa10□□□□□ -0.81
CD44-203ENST00000278386 MRPS24Q96EL2 167 aaKnown RBP10□□□□□ -0.81
CD44-203ENST00000278386 PGLYRP3Q96LB9 341 aa10□□□□□ -0.81
CD44-203ENST00000278386 ABHD14AQ9BUJ0 271 aa10□□□□□ -0.81
CD44-203ENST00000278386 PLSCR3Q9NRY6 295 aa10□□□□□ -0.81
CD44-203ENST00000278386 KCNIP1Q9NZI2 227 aa10□□□□□ -0.81
CD44-203ENST00000278386 RYR3Q15413 4870 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 MYL12BO14950 172 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 GPX5O75715 221 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 OR5H8P0DN80 308 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 RCC1P18754 421 aaPredicted RBP9.99□□□□□ -0.81
CD44-203ENST00000278386 CAPGP40121 348 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 ECI1P42126 302 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 CDX1P47902 265 aaPredicted RBP9.99□□□□□ -0.81
CD44-203ENST00000278386 ZNF134P52741 427 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 RPS11P62280 158 aaKnown RBP eCLIP9.99□□□□□ -0.81
CD44-203ENST00000278386 CFHR3Q02985 330 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 GNMTQ14749 295 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 KIR2DS1Q14954 304 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 LRRC36Q1X8D7 754 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 CT45A1Q5HYN5 189 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 NKAPLQ5M9Q1 402 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 CT45A3Q8NHU0 189 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 KCTD7Q96MP8 289 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 TAF9BQ9HBM6 251 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 OR2S2Q9NQN1 319 aa9.99□□□□□ -0.81
CD44-203ENST00000278386 TRBV5-7A0A0A0MS05 114 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 FAM90A10PA6NDY2 464 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 FAM90A7PA6NKC0 464 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 FAM90A23PA8MXZ1 464 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 LANCL1O43813 399 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 LY86O95711 162 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 IGHG4P01861 327 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 PPP1CCP36873 323 aaKnown RBP9.98□□□□□ -0.81
CD44-203ENST00000278386 VHLP40337 213 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 ADARB1P78563 741 aaKnown RBP9.98□□□□□ -0.81
CD44-203ENST00000278386 ST3GAL4Q11206 333 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 TTC23Q5W5X9 447 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 TMEM65Q6PI78 240 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 NKAIN3Q8N8D7 197 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 RNF152Q8N8N0 203 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 FAM46BQ96A09 425 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 Q96M66 194 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 DERL3Q96Q80 235 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 MRPL20Q9BYC9 149 aaKnown RBP9.98□□□□□ -0.81
CD44-203ENST00000278386 PARP11Q9NR21 331 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 JPT1Q9UK76 154 aa9.98□□□□□ -0.81
CD44-203ENST00000278386 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 PDCD6O75340 191 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 CA11O75493 328 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 SC5DO75845 299 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 FUT3P21217 361 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 MAPK3P27361 379 aaPredicted RBP9.97□□□□□ -0.81
CD44-203ENST00000278386 PSMB8P28062 276 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 ACTBP60709 375 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 DOC2BQ14184 412 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 ZNF260Q3ZCT1 412 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 MORN2Q502X0 79 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 GAPTQ8N292 157 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 OR11H1Q8NG94 326 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 OR52L2PQ8NGH6 319 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 MRPL30Q8TCC3 161 aaKnown RBP9.97□□□□□ -0.81
CD44-203ENST00000278386 THRSPQ92748 146 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 CYYR1Q96J86 154 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 CST11Q9H112 138 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 KIAA1456Q9P272 454 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
CD44-203ENST00000278386 EFCAB10A6NFE3 127 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 NBR2O15453 112 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 RGS11O94810 467 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 IGF1P05019 195 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 OR8U8P0C7N1 319 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 NHLRC4P0CG21 123 aaPredicted RBP9.96□□□□□ -0.82
CD44-203ENST00000278386 CELP19835 753 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 CNTFRP26992 372 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 WNT4P56705 351 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 FHL3Q13643 280 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 AHSA2Q719I0 299 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 CDH26Q8IXH8 852 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 DHRSXQ8N5I4 330 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 ZNF485Q8NCK3 441 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 OR2AK2Q8NG84 335 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 GGHQ92820 318 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 NEDD4LQ96PU5 975 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 OR5B12Q96R08 314 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 GNB4Q9HAV0 340 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 MBNL3Q9NUK0 354 aaKnown RBP9.96□□□□□ -0.82
CD44-203ENST00000278386 ZNF580Q9UK33 172 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 U3KQK5 164 aa9.96□□□□□ -0.82
CD44-203ENST00000278386 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 SAA2-SAA4A0A096LPE2 208 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 TRAV41A0A0B4J266 112 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 G3V318 75 aa9.95□□□□□ -0.82
CD44-203ENST00000278386 HLA-DRB1P01911 266 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms