RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 NABP1Q96AH0 204 aa13.89□□□□□ -0.19
PDZRN3-201ENST00000263666 GPR146Q96CH1 333 aa13.89□□□□□ -0.19
PDZRN3-201ENST00000263666 ENY2Q9NPA8 101 aa13.89□□□□□ -0.19
PDZRN3-201ENST00000263666 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 LINC01387J3KSC0 135 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 CDS2O95674 445 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 DEFA4P12838 97 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 CASP6P55212 293 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 MALSU1Q96EH3 234 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 TM2D1Q9BX74 207 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 LTBP2Q14767 1821 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 CYTIPO60759 359 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 FTH1P19P0C7X4 201 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 FGF5P12034 268 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 TBC1D28Q2M2D7 210 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 ATP1A1-AS1Q5TC04 95 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 FAM185AQ8N0U4 392 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 OR13D1Q8NGV5 346 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 CHRNA10Q9GZZ6 450 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 TMEM100Q9NV29 134 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 B4E171 279 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 AGFG2O95081 481 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 TSPAN7P41732 249 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 C10orf128Q5T292 105 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 ATP5SQ99766 215 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 OR2J1Q9GZK6 312 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 GSN-AS1Q9NRJ2 163 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 PLCE1Q9P212 2302 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 MED13Q9UHV7 2174 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 TMEM54Q969K7 222 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 MSL2Q9HCI7 577 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 SERTAD4Q9NUC0 356 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 PSG11Q9UQ72 335 aa13.88□□□□□ -0.19
PDZRN3-201ENST00000263666 ZNF737O75373 536 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 SMIM6P0DI80 62 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 RPS2P15880 293 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 F2RP25116 425 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 RPS23P62266 143 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 CATR1Q13166 79 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 TRIB1Q96RU8 372 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 WDR54Q9H977 334 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 RPRMQ9NS64 109 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 COL6A6A6NMZ7 2263 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 IGLV3-12A0A075B6K2 115 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 Q3ZCU0 254 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 PRAMEF5Q5TYX0 476 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 PRAMEF6Q5VXH4 476 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 LILRB1Q8NHL6 650 aaPredicted RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 SF3B5Q9BWJ5 86 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 PIEZO2Q9H5I5 2752 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 PGLYRP1O75594 196 aaPredicted RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 SNRPCP09234 159 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 HOXA6P31267 233 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 AESQ08117 197 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 DEPPQ9NTK1 212 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 MTCH1Q9NZJ7 389 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 FBLN5Q9UBX5 448 aa13.87□□□□□ -0.19
PDZRN3-201ENST00000263666 hCG_38984A0A1B0GV85 526 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 PINLYPA6NC86 204 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 CLDN34H7C241 214 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 DVL1O14640 695 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 MMP7P09237 267 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 PGA5P0DJD9 388 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 SELENOVP59797 346 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 HOXA4Q00056 320 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 SSX2Q16385 188 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 RSPO1Q2MKA7 263 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 FFAR4Q5NUL3 377 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 FADS6Q8N9I5 356 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 OR2W1Q9Y3N9 320 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 SH2D1BO14796 132 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 NTF4P34130 210 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 GTF3C1Q12789 2109 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 M1APQ8TC57 530 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 MSI2Q96DH6 328 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 MEGF10Q96KG7 1140 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 GLRX2Q9NS18 164 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 CD5P06127 495 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 PMELP40967 661 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 GFI1BQ5VTD9 330 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 MRPL14Q6P1L8 145 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 NUDT16L1Q9BRJ7 211 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 GPR87Q9BY21 358 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 TP53TG5Q9Y2B4 290 aa13.86□□□□□ -0.19
PDZRN3-201ENST00000263666 CCL1P22362 96 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 SIGLEC12Q96PQ1 595 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 LIN7CQ9NUP9 197 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 REV3LO60673 3130 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 MEOX1P50221 254 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 ERVK-16P61578 105 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 ABHD14BQ96IU4 210 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 FAM173AQ9BQD7 235 aa13.85□□□□□ -0.19
PDZRN3-201ENST00000263666 OR5H1A6NKK0 313 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms