RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 MRGPRGQ86SM5 289 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 OR13C6PQ8NH95 151 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 WDFY2Q96P53 400 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 FAM60AQ9NP50 221 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 SIGLEC7Q9Y286 467 aa11.27□□□□□ -0.6
TTC39A-202ENST00000262676 SHANK3Q9BYB0 1731 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 LINC01387J3KSC0 135 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 SPINT1O43278 529 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 ID1P41134 155 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 FOXO1Q12778 655 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 ZNF273Q14593 569 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 RNPS1Q15287 305 aaKnown RBP11.27□□□□□ -0.61
TTC39A-202ENST00000262676 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 CLEC2AQ6UVW9 174 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 C17orf47Q8NEP4 570 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 OR8G5Q8NG78 346 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 C7orf71A4D174 169 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 SIGLEC5O15389 551 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-202ENST00000262676 MRGPRFQ96AM1 343 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-202ENST00000262676 MMP25Q9NPA2 562 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 CCL28Q9NRJ3 127 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 NKX2-6A6NCS4 301 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 SOCS1O15524 211 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 PMELP40967 661 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 MESP2Q0VG99 397 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 STPG2Q8N412 459 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 PRDM14Q9GZV8 571 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 CES1P1Q9UKY3 287 aa11.27□□□□□ -0.61
TTC39A-202ENST00000262676 NEU3Q9UQ49 428 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.61
TTC39A-202ENST00000262676 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-202ENST00000262676 OR10AC1Q8NH08 325 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 EID2BQ96D98 161 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 ABHD1Q96SE0 405 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 SPOCK3Q9BQ16 436 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 CLN8Q9UBY8 286 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 A0A0B4J2E0 115 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 A0A1B0GX12 115 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 SLC25A17O43808 307 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 CKS2P33552 79 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 FZD5Q13467 585 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 P2RX4Q99571 388 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 TMEM74BQ9NUR3 256 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 ZNF98A6NK75 572 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 ZNF793Q6ZN11 406 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 C9orf62Q8N4C0 152 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 TIMP4Q99727 224 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 PAXXQ9BUH6 204 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 TMEFF2Q9UIK5 374 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-202ENST00000262676 IGHV3OR15-7A0A075B7D8 119 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 CRHP06850 196 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 CLPPQ16740 277 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-202ENST00000262676 FAM169BQ8N8A8 192 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 PGLYRP4Q96LB8 373 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 HIGD1AQ9Y241 93 aa11.26□□□□□ -0.61
TTC39A-202ENST00000262676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
TTC39A-202ENST00000262676 TRGC2P03986 189 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 WDR25Q64LD2 544 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-202ENST00000262676 LYZL2Q7Z4W2 148 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 OR8B12Q8NGG6 310 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 SLC6A13Q9NSD5 602 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 TCRBV5S1A1TA0A578 114 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 HBZP02008 142 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 ZNF735P0CB33 412 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
TTC39A-202ENST00000262676 KRTCAP3Q53RY4 240 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 GUCD1Q96NT3 240 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 A0A1W2PQF6 199 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 RAG2P55895 527 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 C12orf54Q6X4T0 127 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 NT5CQ8TCD5 201 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 PRR19A6NJB7 356 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 PSG2P11465 335 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-202ENST00000262676 GALNSP34059 522 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 FAM216AQ8WUB2 273 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 ASB5Q8WWX0 329 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 SCNM1Q9BWG6 230 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 ZFP64Q9NPA5 681 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 IL20Q9NYY1 176 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 A0A1B0GTL3 188 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 HOXA6P31267 233 aa11.25□□□□□ -0.61
TTC39A-202ENST00000262676 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-202ENST00000262676 ZNF770Q6IQ21 691 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms