RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZNF154Q13106 437 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 ALKBH6Q3KRA9 238 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 DPPA3Q6W0C5 159 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 ZNF497Q6ZNH5 498 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 RBFOX3A6NFN3 312 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 SLC33A1O00400 549 aaPredicted RBP18.55■□□□□ 0.56
RNF39-201ENST00000244360 PSG7Q13046 419 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 ZNF146Q15072 292 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 C9orf106Q8NAJ2 232 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 C20orf24Q9BUV8 137 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 TMEM210A6NLX4 147 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 OR2H2O95918 312 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 IGKV3-15P01624 115 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 CEACAM1P13688 526 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 WDR31Q8NA23 367 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 ISOC2Q96AB3 205 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 SARAFQ96BY9 339 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 GPHA2Q96T91 129 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 CACNA1GO43497 2377 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 OR13C7P0DN81 318 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 F2RP25116 425 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 OR5C1Q8NGR4 320 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 PLPPR1Q8TBJ4 325 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 HIPK2Q9H2X6 1198 aa18.54■□□□□ 0.56
RNF39-201ENST00000244360 PRR33A8MZF0 331 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 PROB1E7EW31 1015 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.53■□□□□ 0.56
RNF39-201ENST00000244360 WRBO00258 174 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 ASCL1P50553 236 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 RAB2AP61019 212 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 CNEP1R1Q8N9A8 125 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 CEACAM4O75871 244 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 SLC25A6P12236 298 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 CXorf66Q5JRM2 361 aaPredicted RBP18.53■□□□□ 0.56
RNF39-201ENST00000244360 VWA1Q6PCB0 445 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 SPSB3Q6PJ21 355 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 C1QL4Q86Z23 238 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 KLF14Q8TD94 323 aaPredicted RBP18.53■□□□□ 0.56
RNF39-201ENST00000244360 TMEM171Q8WVE6 324 aa18.53■□□□□ 0.56
RNF39-201ENST00000244360 SIRPB1O00241 398 aa18.52■□□□□ 0.56
RNF39-201ENST00000244360 DAOP14920 347 aa18.52■□□□□ 0.56
RNF39-201ENST00000244360 MPV17P39210 176 aa18.52■□□□□ 0.56
RNF39-201ENST00000244360 RBMXL1Q96E39 390 aaKnown RBP18.52■□□□□ 0.56
RNF39-201ENST00000244360 HES4Q9HCC6 221 aa18.52■□□□□ 0.56
RNF39-201ENST00000244360 CDIPTO14735 213 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 GPR37O15354 613 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 DFFBO76075 338 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 HBE1P02100 147 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 OMGP23515 440 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 DYNLT3P51808 116 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 ACSF3Q4G176 576 aaPredicted RBP18.51■□□□□ 0.55
RNF39-201ENST00000244360 FAM24BQ8N5W8 94 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 OR10V1Q8NGI7 309 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 ATP5SQ99766 215 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 MAGT1Q9H0U3 335 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 MBNL3Q9NUK0 354 aaKnown RBP18.51■□□□□ 0.55
RNF39-201ENST00000244360 OR1A1Q9P1Q5 309 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 ERRFI1Q9UJM3 462 aaPredicted RBP18.51■□□□□ 0.55
RNF39-201ENST00000244360 WIPI2Q9Y4P8 454 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 ZNF318Q5VUA4 2279 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 NXPH2O95156 264 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 NUBP1P53384 320 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 TLE4Q04727 773 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 TESK1Q15569 626 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 AKR1C8PQ5T2L2 129 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 RARRES2Q99969 163 aa18.51■□□□□ 0.55
RNF39-201ENST00000244360 hCG_1809904A0A1W2PP81 198 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 A0A1W2PR64 198 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 A0A1W2PRV1 198 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 TNFSF12O43508 249 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 IFNA17P01571 189 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 IGHV2-5P01817 119 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 SP5Q6BEB4 398 aaPredicted RBP18.5■□□□□ 0.55
RNF39-201ENST00000244360 SEBOXQ9HB31 216 aaPredicted RBP18.5■□□□□ 0.55
RNF39-201ENST00000244360 PUS1Q9Y606 427 aaKnown RBP eCLIP18.5■□□□□ 0.55
RNF39-201ENST00000244360 URB1O60287 2271 aaKnown RBP18.5■□□□□ 0.55
RNF39-201ENST00000244360 A0A1B0GV50 99 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 A0A1W2PPE2 198 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 MED19A0JLT2 244 aaPredicted RBP18.5■□□□□ 0.55
RNF39-201ENST00000244360 C1QTNF9BB2RNN3 333 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 H0YL77 283 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 SH2D1BO14796 132 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 OR2C1O95371 312 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 HSPB1P04792 205 aaKnown RBP18.5■□□□□ 0.55
RNF39-201ENST00000244360 TUBG1P23258 451 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 HOXC12P31275 282 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 STX12Q86Y82 276 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 ZNF251Q9BRH9 671 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 TUBG2Q9NRH3 451 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 PLSCR4Q9NRQ2 329 aa18.5■□□□□ 0.55
RNF39-201ENST00000244360 IGLV2-14P01704 120 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 ARG1P05089 322 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 RPS23P62266 143 aaKnown RBP18.49■□□□□ 0.55
RNF39-201ENST00000244360 FABP9Q0Z7S8 132 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 DEFB109BQ30KR1 87 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 ZNF506Q5JVG8 444 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 ODF3L1Q8IXM7 274 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 EP300Q09472 2414 aaPredicted RBP18.49■□□□□ 0.55
RNF39-201ENST00000244360 A0A087WWC5 75 aa18.49■□□□□ 0.55
RNF39-201ENST00000244360 A0A1B0GU03 582 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms