RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PRAMEF26H0Y7S4 382 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 GCSHP23434 173 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 RPS16P62249 146 aaKnown RBP11.2□□□□□ -0.62
VAMP4-201ENST00000236192 GUCD1Q96NT3 240 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 CITED1Q99966 193 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 A0A1W2PP55 124 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 RELBQ01201 579 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 DPTQ07507 201 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 ZIC1Q15915 447 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 LINC01590Q5TEZ4 76 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 SIPA1L1O43166 1804 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 PPIAL4DF5H284 164 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 CSN3P07498 182 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 MFAP2P55001 183 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 LRRC10Q5BKY1 277 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 BATF2Q8N1L9 274 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 CA13Q8N1Q1 262 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 Q8NFD4 153 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 CHODLQ9H9P2 273 aa11.2□□□□□ -0.62
VAMP4-201ENST00000236192 TRAV1-1A0A0B4J248 108 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 TMEM14DPA8MWL7 114 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 HYPMO75409 117 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 THY1P04216 161 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 HOXC12P31275 282 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 STPG4Q8N801 248 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 FER1L6-AS1Q8NA97 138 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 CENPVL1A0A0U1RR11 272 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 CDIPTO14735 213 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 CD5LO43866 347 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 ACTL6BO94805 426 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 C16orf52Q8NHV5 167 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 CER1O95813 267 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 C17orf67Q0P5P2 114 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 FAM19A2Q8N3H0 131 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 OR8B12Q8NGG6 310 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 ALKBH3Q96Q83 286 aaPredicted RBP11.19□□□□□ -0.62
VAMP4-201ENST00000236192 APOOQ9BUR5 198 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 RAB9BQ9NP90 201 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 TECRQ9NZ01 308 aaKnown RBP11.19□□□□□ -0.62
VAMP4-201ENST00000236192 TIMM9Q9Y5J7 89 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 ARID1AO14497 2285 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 SLC25A17O43808 307 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 PRICKLE4Q2TBC4 344 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 WFDC8Q8IUA0 241 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 OR8A1Q8NGG7 326 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 TSACCQ96A04 125 aaPredicted RBP11.19□□□□□ -0.62
VAMP4-201ENST00000236192 AMELYQ99218 206 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 HDHD3Q9BSH5 251 aaPredicted RBP11.19□□□□□ -0.62
VAMP4-201ENST00000236192 SH2D2AQ9NP31 389 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 PLA2G3Q9NZ20 509 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 CD207Q9UJ71 328 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 ERRFI1Q9UJM3 462 aaPredicted RBP11.19□□□□□ -0.62
VAMP4-201ENST00000236192 CYSLTR1Q9Y271 337 aa11.19□□□□□ -0.62
VAMP4-201ENST00000236192 IGHV2OR16-5A0A0B4J2B6 119 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 IGHV2-70DA0A0C4DH43 119 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
VAMP4-201ENST00000236192 CCL14Q16627 93 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 CDKN3Q16667 212 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 C9orf135Q5VTT2 229 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 TEX43Q6ZNM6 134 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 WDR54Q9H977 334 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 A0A0G2JMM0 328 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 A0A1W2PPB8 328 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 KIR3DP1A8MWS1 328 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 LIPFP07098 398 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 ZNF816Q0VGE8 651 aaPredicted RBP11.18□□□□□ -0.62
VAMP4-201ENST00000236192 MPV17L2Q567V2 206 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 FAM69BQ5VUD6 431 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 CD160O95971 181 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 TMEM52BQ4KMG9 183 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
VAMP4-201ENST00000236192 ATG4DQ86TL0 474 aaPredicted RBP11.18□□□□□ -0.62
VAMP4-201ENST00000236192 GEMIN7Q9H840 131 aaKnown RBP11.18□□□□□ -0.62
VAMP4-201ENST00000236192 H3BVH4 76 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 DUSP2Q05923 314 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 FOXL1Q12952 345 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 CCL28Q9NRJ3 127 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 CLEC1BQ9P126 229 aa11.18□□□□□ -0.62
VAMP4-201ENST00000236192 ATXN7O15265 892 aaPredicted RBP11.17□□□□□ -0.62
VAMP4-201ENST00000236192 MMP23AO75900 390 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 FAM78AQ5JUQ0 283 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 LRRC75AQ8NAA5 344 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 WBP2Q969T9 261 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 FOXQ1Q9C009 403 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 ZNF703Q9H7S9 590 aaPredicted RBP11.17□□□□□ -0.62
VAMP4-201ENST00000236192 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 CXorf51AA0A1B0GTR3 108 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 RBX1P62877 108 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 RBPJQ06330 500 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 OR1C1Q15619 314 aa11.17□□□□□ -0.62
VAMP4-201ENST00000236192 ZNF788Q6ZQV5 615 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms