RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 HOXA1P49639 335 aaPredicted RBP12.4□□□□□ -0.43
CNOT3-201ENST00000221232 C21orf62-AS1Q17RA5 79 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF808Q8N4W9 903 aaPredicted RBP12.4□□□□□ -0.43
CNOT3-201ENST00000221232 OR5D13Q8NGL4 314 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 IFT22Q9H7X7 185 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 UFSP2Q9NUQ7 469 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 LINC00587B1AMM8 73 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 S100GP29377 79 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 UBE2NP61088 152 aaKnown RBP12.39□□□□□ -0.43
CNOT3-201ENST00000221232 PPP1CBP62140 327 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 Q6P435 159 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 Q6ZS49 121 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 H1FOOQ8IZA3 346 aaPredicted RBP12.39□□□□□ -0.43
CNOT3-201ENST00000221232 TPRX1Q8N7U7 411 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 MDS2Q8NDY4 140 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 SLC25A40Q8TBP6 338 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 PLPPR2Q96GM1 343 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 RNF122Q9H9V4 155 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 OR5B21A6NL26 309 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 FGF8P55075 233 aaPredicted RBP12.39□□□□□ -0.43
CNOT3-201ENST00000221232 LINC00205P59089 165 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 IL24Q13007 206 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 TBC1D28Q2M2D7 210 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 FER1L6-AS2Q96M78 137 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 OBP2BQ9NPH6 170 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 RNF115Q9Y4L5 304 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 MMP24Q9Y5R2 645 aa12.39□□□□□ -0.43
CNOT3-201ENST00000221232 TESK1Q15569 626 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 HMGN3Q15651 99 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 LCN15Q6UWW0 184 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 TRIB1Q96RU8 372 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 PLK3Q9H4B4 646 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 CNOT1A5YKK6 2376 aaKnown RBP12.38□□□□□ -0.43
CNOT3-201ENST00000221232 J3QT63 122 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 NKX2-8O15522 239 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 IGLV2-14P01704 120 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 UCP2P55851 309 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 ARL16Q0P5N6 197 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 EIF2S3LQ2VIR3 472 aaKnown RBP12.38□□□□□ -0.43
CNOT3-201ENST00000221232 SLC16A13Q7RTY0 426 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 COMMD1Q8N668 190 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 COA4Q9NYJ1 87 aa12.38□□□□□ -0.43
CNOT3-201ENST00000221232 MPV17P39210 176 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 SOX8P57073 446 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 LTC4SQ16873 150 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 STX12Q86Y82 276 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 CYB561D1Q8N8Q1 229 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 RTL8AQ9BWD3 113 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 RIMS4Q9H426 269 aaPredicted RBP12.37□□□□□ -0.43
CNOT3-201ENST00000221232 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 ZFP92A6NM28 416 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 M0R296 226 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 IGKV1-5P01602 117 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 RPL23AP62750 156 aaKnown RBP12.37□□□□□ -0.43
CNOT3-201ENST00000221232 PSG7Q13046 419 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF343Q6P1L6 599 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 NANOS1Q8WY41 292 aaKnown RBP12.37□□□□□ -0.43
CNOT3-201ENST00000221232 PSENENQ9NZ42 101 aa12.37□□□□□ -0.43
CNOT3-201ENST00000221232 H3BQ15 152 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 HMGB3O15347 200 aaKnown RBP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 PSPNO60542 156 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 SMPD2O60906 423 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 OR2C1O95371 312 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 MT-ND4LP03901 98 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 NQO2P16083 231 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 RAB5AP20339 215 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 AESQ08117 197 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 OR8G2PQ6IF36 304 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 OR1L1Q8NH94 360 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 RFESDQ8TAC1 157 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 TTC28Q96AY4 2481 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 ATP5SQ99766 215 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 KRASP01116 189 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 IFNA5P01569 189 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 TAGLN2P37802 199 aaKnown RBP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 FABP6P51161 128 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 SPINK9Q5DT21 86 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 KLF2Q9Y5W3 355 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 OR3A1P47881 315 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 ELLP55199 621 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 OR8G1Q15617 311 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 SRSF7Q16629 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF585BQ52M93 769 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 BTNL3Q6UXE8 466 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 NANPQ8TBE9 248 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 MSL2Q9HCI7 577 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms