RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 IFT22Q9H7X7 185 aa18.47■□□□□ 0.55
HOXC8-201ENST00000040584 UBTD1Q9HAC8 227 aa18.47■□□□□ 0.55
HOXC8-201ENST00000040584 MMP26Q9NRE1 261 aa18.47■□□□□ 0.55
HOXC8-201ENST00000040584 CBLN4Q9NTU7 201 aa18.47■□□□□ 0.55
HOXC8-201ENST00000040584 GSKIPQ9P0R6 139 aa18.47■□□□□ 0.55
HOXC8-201ENST00000040584 AK3Q9UIJ7 227 aa18.47■□□□□ 0.55
HOXC8-201ENST00000040584 TMEM218A2RU14 115 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 CLEC18AA5D8T8 446 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 SRRM5B3KS81 715 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 DEFA5Q01523 94 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 CLEC18CQ8NCF0 446 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 ERGIC1Q969X5 290 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 GALNT14Q96FL9 552 aa18.46■□□□□ 0.55
HOXC8-201ENST00000040584 DANCRP0C864 163 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 UCP3P55916 312 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 IAH1Q2TAA2 248 aaPredicted RBP18.46■□□□□ 0.54
HOXC8-201ENST00000040584 SPIN3Q5JUX0 258 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 SVBPQ8N300 66 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 SUCNR1Q9BXA5 334 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 MS4A7Q9GZW8 240 aaPredicted RBP18.46■□□□□ 0.54
HOXC8-201ENST00000040584 PLEKHA2Q9HB19 425 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 DCAF16Q9NXF7 216 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 RNF7Q9UBF6 113 aa18.46■□□□□ 0.54
HOXC8-201ENST00000040584 DCHS2Q6V1P9 2916 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 IGKV1D-8A0A087WSZ0 117 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.45■□□□□ 0.54
HOXC8-201ENST00000040584 ATG12O94817 140 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 CYB5R3P00387 301 aaPredicted RBP18.45■□□□□ 0.54
HOXC8-201ENST00000040584 LHBP01229 141 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 FCGR3AP08637 254 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 FAM157CP0CG43 387 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 ZNF728P0DKX0 622 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 FAM201AQ5SY85 155 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 C11orf71Q6IPW1 123 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 Q6P435 159 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 FAM122CQ6P4D5 195 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 Q8TCH9 128 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 DYRK2Q92630 601 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 NARS2Q96I59 477 aaKnown RBP18.45■□□□□ 0.54
HOXC8-201ENST00000040584 NKX6-2Q9C056 277 aaPredicted RBP18.45■□□□□ 0.54
HOXC8-201ENST00000040584 ZNF286AQ9HBT8 521 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 SPACA1Q9HBV2 294 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 OR14J1Q9UGF5 321 aa18.45■□□□□ 0.54
HOXC8-201ENST00000040584 DYSFO75923 2080 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 HSPB6O14558 160 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 DEGS1O15121 323 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 JTBO76095 146 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 GAPDHP04406 335 aaKnown RBP18.44■□□□□ 0.54
HOXC8-201ENST00000040584 ZNF44P15621 663 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 CEBPDP49716 269 aaPredicted RBP18.44■□□□□ 0.54
HOXC8-201ENST00000040584 S100A10P60903 97 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 SMIM21Q3B7S5 101 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 ABCA11PQ4W5N1 156 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 FIP1L1Q6UN15 594 aaKnown RBP18.44■□□□□ 0.54
HOXC8-201ENST00000040584 LRTM2Q8N967 370 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 OR11L1Q8NGX0 322 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 LPAR3Q9UBY5 353 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 LAMP3Q9UQV4 416 aa18.44■□□□□ 0.54
HOXC8-201ENST00000040584 TRAV24A0A0B4J272 114 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 FAM221AA4D161 298 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 TFF1P04155 84 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 HKR1P10072 659 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 PPOXP50336 477 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 BLOC1S1P78537 153 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 DTX2Q86UW9 622 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 TMED6Q8WW62 240 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 HDHD3Q9BSH5 251 aaPredicted RBP18.43■□□□□ 0.54
HOXC8-201ENST00000040584 IGHV3OR15-7A0A075B7D8 119 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 MSGN1A6NI15 193 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 K7EPK0 472 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 SIRPB1O00241 398 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 KCNAB3O43448 404 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 DEDDO75618 318 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 ZNF205O95201 554 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 OR2H2O95918 312 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 SP5Q6BEB4 398 aaPredicted RBP18.43■□□□□ 0.54
HOXC8-201ENST00000040584 FAM71E2Q8N5Q1 922 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 SUMF2Q8NBJ7 301 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 RDH5Q92781 318 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 SMIM8Q96KF7 97 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 NAA60Q9H7X0 242 aa18.43■□□□□ 0.54
HOXC8-201ENST00000040584 SH2D1BO14796 132 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 HAND1O96004 215 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 IRF2P14316 349 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 RPL12P30050 165 aaKnown RBP18.42■□□□□ 0.54
HOXC8-201ENST00000040584 CD80P33681 288 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 PIGPP57054 158 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 PJVKQ0ZLH3 352 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 SRSF7Q16629 238 aaKnown RBP eCLIP18.42■□□□□ 0.54
HOXC8-201ENST00000040584 C10orf91Q5T1B1 145 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 TSNAXQ99598 290 aaKnown RBP18.42■□□□□ 0.54
HOXC8-201ENST00000040584 TAF9BQ9HBM6 251 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 PRR13Q9NZ81 148 aa18.42■□□□□ 0.54
HOXC8-201ENST00000040584 ZNF705EA8MWA4 302 aaPredicted RBP18.41■□□□□ 0.54
HOXC8-201ENST00000040584 TRIM77I1YAP6 450 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 DNASE2O00115 360 aaPredicted RBP18.41■□□□□ 0.54
HOXC8-201ENST00000040584 TOR1AO14656 332 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 GOSR1O95249 250 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 GLAP06280 429 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 GLP1RP43220 463 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms