RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Cpsf4lE9Q2N0 280 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm20715E9Q3L7 95 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vmn1r173E9Q8V7 313 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm21977F6U3N7 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8247F6VRJ8 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8005F6YKY3 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm3015F6ZAP6 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8212F6ZMY5 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm7954F7BAX1 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8138F7BY56 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8232F7CFJ3 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm17079F7D8Y4 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm21833J3QPK1 500 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8165L7N218 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8122L7N2C7 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm17078M0QW51 211 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Crisp2P16563 243 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rab6aP35279 208 aaKnown RBP7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rps27aP62983 156 aaKnown RBP7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1507Q0VEP0 313 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zfp872Q3UVL3 465 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Q6DIA7 600 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Slc25a47Q6IS41 310 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rtn4rl2Q7M6Z0 420 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1106Q7TR57 312 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tmem127Q8BGP5 238 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Lsm11Q8BUV6 361 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Kiaa0513Q8R0A7 407 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Pnpla3Q91WW7 413 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tmem50bQ9D1X9 158 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 MmabQ9D273 237 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr878Q9EQA9 314 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1264Q9R0K2 308 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 SonQ9QX47 2444 aaKnown RBP7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Prss47A0A0N4SVQ0 395 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm10376D3YXI8 184 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm3676D3Z236 184 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Wisp3D3Z5L9 354 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zfp820E9Q5G8 549 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr69E9Q7C5 316 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm10375L7N286 184 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm3573L7N292 184 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dkk1O54908 272 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rbbp9O88851 186 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Hdac3O88895 424 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 UbbP0CG49 305 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mpv17P19258 176 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Asgr2P24721 301 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Htr5aP30966 357 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Q3TEI4 1023 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Pdp1Q3UV70 538 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dhrs9Q58NB6 319 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr324Q5NCC7 333 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 DbpQ60925 325 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 ArhgdibQ61599 200 aaKnown RBP7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Nup62Q63850 526 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 SrrdQ8K2M3 249 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1501Q8VFQ3 315 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr339Q8VGK8 309 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 CenpmQ9CQA0 180 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Atg12Q9CQY1 141 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Atp23Q9CWQ3 201 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 3110001I22RikQ9CZ70 312 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Il36bQ9D6Z6 183 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 1700001F09RikQ9DAR5 184 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm4779A0A1B0GR91 561 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr417F8VQB1 309 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Col8a2P25318 699 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 ElnP54320 860 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 CtdsplP58465 276 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 NrgnP60761 78 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Defb20Q30KP3 96 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sec14l3Q5SQ27 401 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 PiglQ5SX19 252 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Spred3Q6P6N5 408 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 GcsamQ6RFH4 181 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tspan9Q8BJU2 239 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ap3s2Q8BSZ2 193 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Cmtm4Q8CJ61 208 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vmn1r4Q8R2D3 297 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1309Q8VF83 320 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 QprtQ91X91 299 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr116Q923Q6 321 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ripply3Q924S9 152 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mzt2Q9CQ25 159 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Q9CWB7 115 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dcbld1Q9D4J3 503 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Aig1Q9D8B1 262 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dock11A2AF47 2073 aa7.44□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dnajc13D4AFX7 2248 aaKnown RBP7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Trav5-1A0A075B5Z7 114 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Spink14B9EJP9 96 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm21818J3KMS6 170 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Agr2O88312 175 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Hmga2P52927 108 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 AbraclQ4KML4 81 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mapk3Q63844 380 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 IslrQ6GU68 428 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sult1c1Q80VR3 304 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ldlrad4Q8BWJ4 306 aa7.43□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms