RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm3550W4VSN7 160 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr465-ps1A0A0U1RPZ4 315 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1490A0A1L1SVH0 321 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mamld1P0C6A2 803 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cbr1P48758 277 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Btg2Q04211 158 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Plk3Q60806 631 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Btn1a1Q62556 524 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm5771Q792Y9 245 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 BtlaQ7TSA3 306 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Edem2Q8BJT9 577 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Neil3Q8K203 606 aaKnown RBP9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1279Q8VF38 313 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1411Q8VFC4 323 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr578Q8VH17 313 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ethe1Q9DCM0 254 aa9.14□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ighv1-42A0A0A6YY38 117 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr221B2RVX8 311 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm42421F6X8D5 166 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 H2-M10.1O19443 331 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cdx2P43241 311 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gfod1Q3UHD2 390 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tbpl2Q6SJ95 350 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gpr6Q6YNI2 363 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1283Q7TQY4 305 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mob3cQ8BJG4 216 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Lrrc61Q8R2R5 259 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr995Q8VF74 315 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cthrc1Q9D1D6 245 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Dll4Q9JI71 686 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Xcr1Q9R0M1 322 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 StrapQ9Z1Z2 350 aaKnown RBP9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Prrt2E9PUL5 346 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 1700003H04RikE9PXM2 192 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rpp30O88796 268 aaKnown RBP9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Wfdc5Q4KXB6 126 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Eml2Q7TNG5 649 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tox4Q8BU11 619 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem144Q8VEH0 348 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cst6Q9D1B1 149 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Fbxl6Q9QXW0 535 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Plxna1P70206 1894 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Col11a1Q61245 1804 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Igkv15-103A0A140T8P3 115 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm20939L7N243 523 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 NcanP55066 1268 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mpc1P63030 109 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr5Q60889 312 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem178aQ9CZ16 297 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tstd3Q9D0B5 157 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Chst4Q9R1I1 388 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Arid2E9Q7E2 1828 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Map1bP14873 2464 aaKnown RBP9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm5890A0A140LI04 305 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr914E9PW59 316 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cdhr4H3BJZ2 783 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 EnamO55196 1274 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Abcd4O89016 606 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 C5ar1P30993 351 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Sf3b6P59708 125 aaKnown RBP9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 NrtnP97463 195 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Slc34a1Q60825 637 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr504Q7TRU7 318 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Q80UB0 333 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 SdhaQ8K2B3 664 aaKnown RBP9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ntng2Q8R4F1 589 aaKnown RBP9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr974Q8VH09 310 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Nxph3Q91VX5 252 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mrgpra4Q91WW2 313 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cldn14Q9Z0S3 239 aa9.13□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 AipO08915 330 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 DhodhO35435 395 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 MyogP12979 224 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 FblP35550 327 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Nhlrc4Q3UP44 136 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zic2Q62520 530 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Dact2Q7TN08 757 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zfp954Q7TNU5 416 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gpbar1Q80SS6 329 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem106cQ80VP8 260 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ldlrad4Q8BWJ4 306 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Txnl1Q8CDN6 289 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr167Q8VGJ5 312 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 RhebQ921J2 184 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ankrd10Q99LW0 415 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rpp14Q9CQH8 122 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Xrcc2Q9CX47 278 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Sfrp5Q9WU66 314 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tusc2Q9WVF8 110 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm12666A2AMD0 254 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 RnlsA7RDN6 342 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mdh2P08249 338 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Csf2rb2P26954 878 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 KrasP32883 189 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Pip5k1aP70182 546 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cd300lbQ3U497 209 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Taar9Q5QD04 348 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 GcdhQ60759 438 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 B430218F22RikQ8BQR5 223 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 FkrpQ8CG64 494 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms