RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 NOTOA8MTQ0 251 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 F2RL2O00254 374 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 VEGFCP49767 419 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 MOGAT2Q3SYC2 334 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 OR5R1Q8NH85 324 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 OR9G1Q8NH87 305 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 OR1L1Q8NH94 360 aa21.53■■□□□ 1.04
VEGFA-231ENST00000640499 BUB1B-PAK6H3BSN5 160 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 J3QR06 171 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 NAPSAO96009 420 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 AWAT1Q58HT5 328 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 OLFML2AQ68BL7 652 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 CCBE1Q6UXH8 406 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-231ENST00000640499 NDNFQ8TB73 568 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 ZNF596Q8TC21 504 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 ARHGAP5-AS1Q96IT6 56 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 DPM3Q9P2X0 92 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 HSF4Q9ULV5 492 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 KCNK7Q9Y2U2 307 aa21.52■■□□□ 1.04
VEGFA-231ENST00000640499 MXD1Q05195 221 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 FAM189A2Q15884 450 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 LY6EQ16553 131 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 ZNF880Q6PDB4 577 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 HDHD3Q9BSH5 251 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-231ENST00000640499 PECRQ9BY49 303 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 PLEKHJ1Q9NW61 149 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 GFOD1Q9NXC2 390 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 AK3Q9UIJ7 227 aa21.51■■□□□ 1.03
VEGFA-231ENST00000640499 IGHV3-43A0A0B4J1X8 118 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 A0A1W2PPE3 182 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 TOR1AO14656 332 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 HBZP02008 142 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 IGHV3-43DP0DP04 118 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 PRRX1P54821 245 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 SLC16A12Q6ZSM3 486 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 OR52M1Q8NGK5 317 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 MMP28Q9H239 520 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 TAF9BQ9HBM6 251 aa21.5■■□□□ 1.03
VEGFA-231ENST00000640499 RAB27BO00194 218 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 SDCBPO00560 298 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-231ENST00000640499 RAB6AP20340 208 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 GNG10P50151 68 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 DYNLT3P51808 116 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 DIAPH2-AS1Q14236 149 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 FBLN7Q53RD9 439 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 C6orf183Q5T699 404 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 SFXN4Q6P4A7 337 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 GDPGP1Q6ZNW5 385 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 VCX3AQ9NNX9 186 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 DAPK2Q9UIK4 370 aa21.49■■□□□ 1.03
VEGFA-231ENST00000640499 BTBD17A6NE02 478 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 LEUTXA8MZ59 168 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 CHST1O43916 411 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 NDUFA7O95182 113 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 MDKP21741 143 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-231ENST00000640499 RPL15P61313 204 aaKnown RBP21.48■■□□□ 1.03
VEGFA-231ENST00000640499 TPTE2P1Q5T6R2 138 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 C12orf54Q6X4T0 127 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 Q6ZTK2 550 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 PRR18Q8N4B5 295 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 OR56B1Q8NGI3 324 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 PTX4Q96A99 478 aa21.48■■□□□ 1.03
VEGFA-231ENST00000640499 TRBV6-6A0A0A6YYG2 114 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 A6NDX4 124 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 SLC31A2O15432 143 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 AIREO43918 545 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 SNRPBP14678 240 aaKnown RBP21.47■■□□□ 1.03
VEGFA-231ENST00000640499 RANBP1P43487 201 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 ZNF134P52741 427 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 FOXL1Q12952 345 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 HMGN3Q15651 99 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 ZNF439Q8NDP4 499 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 OR13F1Q8NGS4 319 aa21.47■■□□□ 1.03
VEGFA-231ENST00000640499 RAG2P55895 527 aa21.46■■□□□ 1.03
VEGFA-231ENST00000640499 LSM3P62310 102 aaKnown RBP21.46■■□□□ 1.03
VEGFA-231ENST00000640499 TRAT1Q6PIZ9 186 aa21.46■■□□□ 1.03
VEGFA-231ENST00000640499 Q6ZSV7 163 aa21.46■■□□□ 1.03
VEGFA-231ENST00000640499 ZNF554Q86TJ5 538 aa21.46■■□□□ 1.03
VEGFA-231ENST00000640499 FUNDC2Q9BWH2 189 aa21.46■■□□□ 1.03
VEGFA-231ENST00000640499 TCF19Q9Y242 345 aa21.46■■□□□ 1.03
VEGFA-231ENST00000640499 SPINT2O43291 252 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 CRYBA1P05813 215 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 GNMTQ14749 295 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 LINC00311Q8N616 119 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 C8orf31Q8N9H6 132 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 OR52L2PQ8NGH6 319 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 OR10V1Q8NGI7 309 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 OR10R2Q8NGX6 335 aa21.45■■□□□ 1.02
VEGFA-231ENST00000640499 CD24P25063 80 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 RPS19P39019 145 aaKnown RBP21.44■■□□□ 1.02
VEGFA-231ENST00000640499 TIMM50Q3ZCQ8 353 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 CT45A1Q5HYN5 189 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 OR5H6Q8NGV6 325 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 CT45A3Q8NHU0 189 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 LGALS14Q8TCE9 139 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 CREB3L1Q96BA8 519 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 RAB3CQ96E17 227 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 KCNIP1Q9NZI2 227 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 MMP24Q9Y5R2 645 aa21.44■■□□□ 1.02
VEGFA-231ENST00000640499 MFNGO00587 321 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms