RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 FAM90A9PA6NNJ1 464 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 C12orf77C9JDV5 145 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 M0QZK8 103 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 HSD17B6O14756 317 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 SPINT2O43291 252 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 UBBP0CG47 229 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 FUT3P21217 361 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 C9orf152Q5JTZ5 239 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM53AQ6NSI3 398 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 NDUFA11Q86Y39 141 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 THNSL2Q86YJ6 484 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 C1QL4Q86Z23 238 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 PRR18Q8N4B5 295 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 OR5AU1Q8NGC0 362 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 PHYHIPQ92561 330 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 TMEM203Q969S6 136 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 CCDC90BQ9GZT6 254 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 DUSP21Q9H596 190 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 RAB9BQ9NP90 201 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
CACNA1A-259ENST00000638114 CCRL2O00421 344 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 PDCD6O75340 191 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 CA11O75493 328 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 OPN1MWP04001 364 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 AMY1AP04745 511 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 AMY2AP04746 511 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 GLAP06280 429 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 TMEM11P17152 192 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 SRMP19623 302 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 REG1BP48304 166 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 LOXL3P58215 753 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 EMX1Q04741 257 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 PDLIM3Q53GG5 364 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 NKAPLQ5M9Q1 402 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 SIGIRRQ6IA17 410 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 OR10K2Q6IF99 312 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 CENPVQ7Z7K6 275 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 GNG12Q9UBI6 72 aa13.35□□□□□ -0.27
CACNA1A-259ENST00000638114 SC5DO75845 299 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 IGKV1D-33P01593 117 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 IGKV1-33P01594 117 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 HBZP02008 142 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 GAPDHP04406 335 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 UCHL1P09936 223 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 RCC1P18754 421 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 CRHBPP24387 322 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 IL3RAP26951 378 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 HSPA13P48723 471 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 ZNF816Q0VGE8 651 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 HNF4GQ14541 408 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 C1orf100Q5SVJ3 147 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 TRAT1Q6PIZ9 186 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 MOB3BQ86TA1 216 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 GAPTQ8N292 157 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 LINC00311Q8N616 119 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 OR10V1Q8NGI7 309 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 OR1L1Q8NH94 360 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 R3HDM4Q96D70 268 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 CYYR1Q96J86 154 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 CNBD2Q96M20 576 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 TMEM59Q9BXS4 323 aa13.34□□□□□ -0.27
CACNA1A-259ENST00000638114 IGHV3-72A0A0B4J1Y9 119 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 A0A1W2PRX2 142 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 VSIG8P0DPA2 414 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 HTR2CP28335 458 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 TPBGQ13641 420 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 TMEM30BQ3MIR4 351 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 PRSS48Q7RTY5 328 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 OR4F17Q8NGA8 305 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 NEDD4LQ96PU5 975 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 OR4F4Q96R69 305 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 KCNK15Q9H427 330 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 ISYNA1Q9NPH2 558 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 KCNIP1Q9NZI2 227 aa13.33□□□□□ -0.28
CACNA1A-259ENST00000638114 ADARB2-AS1A8MUL3 147 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 SLC31A2O15432 143 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 MAP2K4P45985 399 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 RPS27AP62979 156 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 MLLT11Q13015 90 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 TRAM1Q15629 374 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 Q3ZCU0 254 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 C5orf56Q8N8D9 126 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 OR6M1Q8NGM8 313 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 KCNG3Q8TAE7 436 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 TAF9BQ9HBM6 251 aa13.32□□□□□ -0.28
CACNA1A-259ENST00000638114 G3V4G9 280 aa13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 SLC22A1O15245 554 aa13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 CPEP16870 476 aa13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 CHATP28329 748 aa13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 CD83Q01151 205 aa13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 UNC119Q13432 240 aa13.31□□□□□ -0.28
CACNA1A-259ENST00000638114 TMEM91Q6ZNR0 172 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms