RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 C9orf152Q5JTZ5 239 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 NKAPLQ5M9Q1 402 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 TRAT1Q6PIZ9 186 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 PRSS48Q7RTY5 328 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 THNSL2Q86YJ6 484 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 OR8H3Q8N146 312 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 PRR18Q8N4B5 295 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 DRAM1Q8N682 238 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 OR56B4Q8NH76 319 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 NEDD4LQ96PU5 975 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 ISYNA1Q9NPH2 558 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 GFOD1Q9NXC2 390 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 KCNIP1Q9NZI2 227 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 BLOC1S6Q9UL45 172 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 M0QZK8 103 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 CCRL2O00421 344 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 PDCD6O75340 191 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 SNRNP70P08621 437 aaKnown RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 UCHL1P09936 223 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 CD28P10747 220 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 TMEM11P17152 192 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 PSMA1P25786 263 aaKnown RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 HTR2CP28335 458 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 MAP2K4P45985 399 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 RPS25P62851 125 aaKnown RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 DEFA6Q01524 100 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 EMX1Q04741 257 aaPredicted RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 MLLT11Q13015 90 aaPredicted RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 TPBGQ13641 420 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 C1orf100Q5SVJ3 147 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
PNKP-228ENST00000637325 MOB3BQ86TA1 216 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 LYG1Q8N1E2 194 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 TMEM59Q9BXS4 323 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 GNG12Q9UBI6 72 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 MOB4Q9Y3A3 225 aa11.03□□□□□ -0.64
PNKP-228ENST00000637325 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 SH2D7A6NKC9 451 aaPredicted RBP11.02□□□□□ -0.65
PNKP-228ENST00000637325 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 HSD17B6O14756 317 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 ARL6IP5O75915 188 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 HBZP02008 142 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 LPLP06858 475 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 VSIG8P0DPA2 414 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 CPEP16870 476 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 LOXL3P58215 753 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 HNF4GQ14541 408 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 TMEM30BQ3MIR4 351 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 SIGIRRQ6IA17 410 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 OR10K2Q6IF99 312 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 LINC00311Q8N616 119 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 OR1L1Q8NH94 360 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 KCNG3Q8TAE7 436 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 MGLLQ99685 303 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 OCSTAMPQ9BR26 566 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 WNT10AQ9GZT5 417 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 PLGRKTQ9HBL7 147 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 RAB26Q9ULW5 256 aa11.02□□□□□ -0.65
PNKP-228ENST00000637325 FAM90A9PA6NNJ1 464 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 WIPF1O43516 503 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 SC5DO75845 299 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 ATP6V1G2O95670 118 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 BPNT1O95861 308 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 IGKV1D-33P01593 117 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 IGKV1-33P01594 117 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 RCC1P18754 421 aaPredicted RBP11.01□□□□□ -0.65
PNKP-228ENST00000637325 REG1BP48304 166 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 RPS27AP62979 156 aaKnown RBP11.01□□□□□ -0.65
PNKP-228ENST00000637325 ZNF816Q0VGE8 651 aaPredicted RBP11.01□□□□□ -0.65
PNKP-228ENST00000637325 Q3ZCU0 254 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 FBLN7Q53RD9 439 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 FAM53AQ6NSI3 398 aaPredicted RBP11.01□□□□□ -0.65
PNKP-228ENST00000637325 TMEM91Q6ZNR0 172 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 C8orf31Q8N9H6 132 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 OR10V1Q8NGI7 309 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 OR6M1Q8NGM8 313 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
PNKP-228ENST00000637325 TAF9BQ9HBM6 251 aa11.01□□□□□ -0.65
PNKP-228ENST00000637325 IGHV1-3A0A0C4DH29 117 aa11□□□□□ -0.65
PNKP-228ENST00000637325 SLC22A1O15245 554 aa11□□□□□ -0.65
PNKP-228ENST00000637325 CALRP27797 417 aaKnown RBP11□□□□□ -0.65
PNKP-228ENST00000637325 P2RY14Q15391 338 aa11□□□□□ -0.65
PNKP-228ENST00000637325 ZNF367Q7RTV3 350 aa11□□□□□ -0.65
PNKP-228ENST00000637325 GAPTQ8N292 157 aa11□□□□□ -0.65
PNKP-228ENST00000637325 MRPL30Q8TCC3 161 aaKnown RBP11□□□□□ -0.65
PNKP-228ENST00000637325 URM1Q9BTM9 101 aaKnown RBP11□□□□□ -0.65
PNKP-228ENST00000637325 FAAP24Q9BTP7 215 aa11□□□□□ -0.65
PNKP-228ENST00000637325 KCNK15Q9H427 330 aa11□□□□□ -0.65
PNKP-228ENST00000637325 CHMP1AQ9HD42 196 aaPredicted RBP11□□□□□ -0.65
PNKP-228ENST00000637325 OR2S2Q9NQN1 319 aa11□□□□□ -0.65
PNKP-228ENST00000637325 AK6Q9Y3D8 172 aaKnown RBP11□□□□□ -0.65
PNKP-228ENST00000637325 IGHV3-72A0A0B4J1Y9 119 aa10.99□□□□□ -0.65
PNKP-228ENST00000637325 SLC31A2O15432 143 aa10.99□□□□□ -0.65
PNKP-228ENST00000637325 KCNAB3O43448 404 aa10.99□□□□□ -0.65
PNKP-228ENST00000637325 AMY1AP04745 511 aa10.99□□□□□ -0.65
PNKP-228ENST00000637325 AMY2AP04746 511 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms