RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 C17orf78Q8N4C9 275 aa10.85□□□□□ -0.67
LINC00540-203ENST00000631321 TMEM217Q8N7C4 229 aa10.85□□□□□ -0.67
LINC00540-203ENST00000631321 MDS2Q8NDY4 140 aa10.85□□□□□ -0.67
LINC00540-203ENST00000631321 OR10V1Q8NGI7 309 aa10.85□□□□□ -0.67
LINC00540-203ENST00000631321 METTL1Q9UBP6 276 aaKnown RBP10.85□□□□□ -0.67
LINC00540-203ENST00000631321 PRSS50Q9UI38 385 aa10.85□□□□□ -0.67
LINC00540-203ENST00000631321 ERRFI1Q9UJM3 462 aaPredicted RBP10.85□□□□□ -0.67
LINC00540-203ENST00000631321 KLF13Q9Y2Y9 288 aaPredicted RBP10.85□□□□□ -0.67
LINC00540-203ENST00000631321 A0A1W2PPE2 198 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 J3QW42 95 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 IGLV2-14P01704 120 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 HSPB1P04792 205 aaKnown RBP10.84□□□□□ -0.67
LINC00540-203ENST00000631321 S100A8P05109 93 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 SERPINE2P07093 398 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 SP1P08047 785 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 MEOX1P50221 254 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 RPS23P62266 143 aaKnown RBP10.84□□□□□ -0.67
LINC00540-203ENST00000631321 AKR1C8PQ5T2L2 129 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 LINC00696Q6ZRV3 163 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 STX12Q86Y82 276 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 C1QL4Q86Z23 238 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 NANOS1Q8WY41 292 aaKnown RBP10.84□□□□□ -0.67
LINC00540-203ENST00000631321 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
LINC00540-203ENST00000631321 hCG_1809904A0A1W2PP81 198 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 A0A1W2PR64 198 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 A0A1W2PRV1 198 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 RHBDL1O75783 438 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 IGKV1-39P01597 117 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 IGHV2-5P01817 119 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 HBE1P02100 147 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 IGKV1D-39P04432 117 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 ARG1P05089 322 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 PSG2P11465 335 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 CA6P23280 308 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 MPLP40238 635 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 RPL23AP62750 156 aaKnown RBP10.84□□□□□ -0.67
LINC00540-203ENST00000631321 RUNX1Q01196 453 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 TLE4Q04727 773 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 ICAM4Q14773 271 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 TESK1Q15569 626 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 C3AR1Q16581 482 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 OR2T2Q6IF00 324 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 FAM24BQ8N5W8 94 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 WSB1Q9Y6I7 421 aa10.84□□□□□ -0.67
LINC00540-203ENST00000631321 A0A087WWC5 75 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 SCAF4O95104 1147 aaKnown RBP10.83□□□□□ -0.68
LINC00540-203ENST00000631321 S100A6P06703 90 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 ERVK11-1P61568 191 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 TMEM164Q5U3C3 297 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 FBXW9Q5XUX1 488 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 ZNF497Q6ZNH5 498 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 MDP1Q86V88 176 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 Q8IYB0 196 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 OR51H1Q8NH63 302 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 OR1A1Q9P1Q5 309 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00540-203ENST00000631321 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 ARGFXA6NJG6 315 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 H3BQ15 152 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 MT-CO3P00414 261 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 Q6ZRM9 215 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 OR10G4Q8NGN3 311 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 MUCL1Q96DR8 90 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 RTL8AQ9BWD3 113 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 SEBOXQ9HB31 216 aaPredicted RBP10.83□□□□□ -0.68
LINC00540-203ENST00000631321 LIPGQ9Y5X9 500 aa10.83□□□□□ -0.68
LINC00540-203ENST00000631321 KLRC4-KLRK1H3BQV0 150 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 NXPH3O95157 252 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 CNOT4O95628 575 aaKnown RBP10.82□□□□□ -0.68
LINC00540-203ENST00000631321 IFNA5P01569 189 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 ZNF14P17017 642 aaPredicted RBP10.82□□□□□ -0.68
LINC00540-203ENST00000631321 SLC10A1Q14973 349 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 WDR86Q86TI4 376 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 ARRDC1-AS1Q9H2J1 176 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
LINC00540-203ENST00000631321 AHCTF1Q8WYP5 2266 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 SLC33A1O00400 549 aaPredicted RBP10.82□□□□□ -0.68
LINC00540-203ENST00000631321 OR2C1O95371 312 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 CD200P41217 278 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 RAB2AP61019 212 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 HAGHQ16775 308 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 HEPN1Q6WQI6 88 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 WDYHV1Q96HA8 205 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
LINC00540-203ENST00000631321 WIPI2Q9Y4P8 454 aa10.82□□□□□ -0.68
LINC00540-203ENST00000631321 A0A1W2PR80 420 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 OR2H2O95918 312 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 IGKV1-5P01602 117 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 OR8U8P0C7N1 319 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 SPINK2P20155 84 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 B2MP61769 119 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 ACSF3Q4G176 576 aaPredicted RBP10.81□□□□□ -0.68
LINC00540-203ENST00000631321 RAB39BQ96DA2 213 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 C12orf49Q9H741 205 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 CACNG5Q9UF02 275 aa10.81□□□□□ -0.68
LINC00540-203ENST00000631321 POLDIP2Q9Y2S7 368 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms