RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 TSEN15Q8WW01 171 aaKnown RBP12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 ISOC1Q96CN7 298 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 GABARAPL3Q9BY60 117 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 OR51J1Q9H342 316 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 IMPAD1Q9NX62 359 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF581Q9P0T4 197 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 G3V318 75 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 SLC31A2O15432 143 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 ORC5O43913 435 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 CSTBP04080 98 aaKnown RBP12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 RAB9AP51151 201 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 Q3ZCU0 254 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 SLC25A48Q6ZT89 311 aaKnown RBP12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 AMIGO2Q86SJ2 522 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 NEK7Q8TDX7 302 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 TRUB1Q8WWH5 349 aaKnown RBP12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 DLX4Q92988 240 aaPredicted RBP12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 MYCBPQ99417 103 aaPredicted RBP12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
PDLIM3-213ENST00000629667 TMEM212A6NML5 194 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 CDRT1O95170 752 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 IGLV1-40P01703 118 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF137PP52743 207 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 RBM11P57052 281 aaKnown RBP12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 GALEQ14376 348 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 SRSF7Q16629 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 OR52N1Q8NH53 320 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 OR5AK2Q8NH90 309 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 GNG12Q9UBI6 72 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 ING4Q9UNL4 249 aa12.11□□□□□ -0.47
PDLIM3-213ENST00000629667 TRAV41A0A0B4J266 112 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 LINC01619G3V211 115 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 AIPO00170 330 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 GEMIN2O14893 280 aaKnown RBP12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 LDLRAD4O15165 306 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 VHLP40337 213 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 SLURP1P55000 103 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 LSAMPQ13449 338 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 LINC00596Q86U02 117 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 LHFPL3Q86UP9 236 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 STX19Q8N4C7 294 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 S100A13Q99584 98 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 ISG20L2Q9H9L3 353 aaKnown RBP12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 RAB9BQ9NP90 201 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 AP4S1Q9Y587 144 aa12.1□□□□□ -0.47
PDLIM3-213ENST00000629667 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 SNTNA6NMZ2 147 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 SPINT2O43291 252 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 MT-ND4P03905 459 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 OR8U9P0C7N5 309 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 SERPINA2P20848 420 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 SOX2P48431 317 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF134P52741 427 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 MPV17LQ2QL34 196 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 CT45A1Q5HYN5 189 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 MEDAGQ5VYS4 303 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF529Q6P280 563 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ACSM6Q6P461 480 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF497Q6ZNH5 498 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 SYS1Q8N2H4 156 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 OR10V1Q8NGI7 309 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ARPC1AQ92747 370 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 PAK1IP1Q9NWT1 392 aaPredicted RBP12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 TAS2R4Q9NYW5 299 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 IL36GQ9NZH8 169 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 EXOGQ9Y2C4 368 aaKnown RBP12.09□□□□□ -0.47
PDLIM3-213ENST00000629667 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 MAGEA13PA6NCF6 341 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 C12orf77C9JDV5 145 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 LANCL1O43813 399 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 IGHV4-30-4P0DP06 118 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 FCGR1AP12314 374 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 ACTBP60709 375 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 PITPNAQ00169 270 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 SLC25A30Q5SVS4 291 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 SYT6Q5T7P8 510 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms