RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 HIST2H2BDQ6DRA6 164 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 GAPTQ8N292 157 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 Q8N2B8 174 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 OR52M1Q8NGK5 317 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 OR6M1Q8NGM8 313 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 OR1L1Q8NH94 360 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 NEDD4LQ96PU5 975 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 SULT4A1Q9BR01 284 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 PRSS22Q9GZN4 317 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 PLGRKTQ9HBL7 147 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 GFOD1Q9NXC2 390 aa11.38□□□□□ -0.59
PNKP-223ENST00000629179 RRP15Q9Y3B9 282 aaKnown RBP11.38□□□□□ -0.59
PNKP-223ENST00000629179 AMMECR1Q9Y4X0 333 aaPredicted RBP11.38□□□□□ -0.59
PNKP-223ENST00000629179 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 H3BUI4 141 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 SLC17A2O00624 439 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 TIMM23O14925 209 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 MRPS14O60783 128 aaKnown RBP11.37□□□□□ -0.59
PNKP-223ENST00000629179 CA11O75493 328 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 HBZP02008 142 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 VSIG10L2P0DP72 767 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 CHATP28329 748 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 MNDAP41218 407 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 CLDN12P56749 244 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 MADCAM1Q13477 382 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 CCDC144NLQ6NUI1 221 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 TREML4Q6UXN2 200 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 C6orf201Q7Z4U5 140 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 SPARTQ8N0X7 666 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 PRR18Q8N4B5 295 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 SVOPQ8N4V2 548 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 OR10X1Q8NGY0 326 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 FAAP24Q9BTP7 215 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 TM2D1Q9BX74 207 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 SERTAD4Q9NUC0 356 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 NDUFB11Q9NX14 153 aa11.37□□□□□ -0.59
PNKP-223ENST00000629179 A0A0A6YYD4 124 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 A0A1W2PPI3 338 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 SPINT2O43291 252 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 ARSBP15848 533 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 BLVRBP30043 206 aaPredicted RBP11.36□□□□□ -0.59
PNKP-223ENST00000629179 HERPUD1Q15011 391 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 RAB11BQ15907 218 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 C11orf88Q6PI97 169 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 DRAM1Q8N682 238 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 C11orf44Q8N8P7 122 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 DTX3Q8N9I9 347 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 OR51D1Q8NGF3 324 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 OR10V1Q8NGI7 309 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 OR56B4Q8NH76 319 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 MRPL30Q8TCC3 161 aaKnown RBP11.36□□□□□ -0.59
PNKP-223ENST00000629179 CAPSLQ8WWF8 208 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 SLC25A33Q9BSK2 321 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
PNKP-223ENST00000629179 LPAR5Q9H1C0 372 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 LIN7BQ9HAP6 207 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 TAF9BQ9HBM6 251 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 LRRC42Q9Y546 428 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 V9GY05 133 aa11.36□□□□□ -0.59
PNKP-223ENST00000629179 TRDV1A0A1B0GX56 115 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 SHISA3A0PJX4 238 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 FAM90A9PA6NNJ1 464 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 M0QZ24 198 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 SLC31A2O15432 143 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 SOCS1O15524 211 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 OR2F2O95006 317 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 SNRNP70P08621 437 aaKnown RBP11.35□□□□□ -0.59
PNKP-223ENST00000629179 REG1BP48304 166 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
PNKP-223ENST00000629179 HES5Q5TA89 166 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 UBE2UQ5VVX9 321 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 CD200R1LQ6Q8B3 271 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 Q6ZTK2 550 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 C16orf82Q7Z2V1 217 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 CFHR4Q92496 578 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 RBM14Q96PK6 669 aaKnown RBP11.35□□□□□ -0.59
PNKP-223ENST00000629179 OCSTAMPQ9BR26 566 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 MBNL3Q9NUK0 354 aaKnown RBP11.35□□□□□ -0.59
PNKP-223ENST00000629179 KCNIP1Q9NZI2 227 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 GNG12Q9UBI6 72 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 NOTCH3Q9UM47 2321 aa11.35□□□□□ -0.59
PNKP-223ENST00000629179 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
PNKP-223ENST00000629179 CCRL2O00421 344 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 HSD17B6O14756 317 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 FAM106CPP0CH98 169 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 PSMB9P28065 219 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 RAB7AP51149 207 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 ZNF134P52741 427 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 C2orf76Q3KRA6 126 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 CT45A1Q5HYN5 189 aa11.34□□□□□ -0.59
PNKP-223ENST00000629179 THNSL2Q86YJ6 484 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 351.6 ms