RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 C11orf88Q6PI97 169 aa11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 AKR1E2Q96JD6 320 aa11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 RANBP3Q9H6Z4 567 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 BEX1Q9HBH7 125 aa11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 C12orf4Q9NQ89 552 aa11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 MMP24Q9Y5R2 645 aa11.35□□□□□ -0.59
SNRPA1-216ENST00000626000 TRBV6-6A0A0A6YYG2 114 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 LOC100506127A0A0U1RQW1 187 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 UBE2QL1A1L167 161 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 BUB1B-PAK6H3BSN5 160 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 J3QR06 171 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 MMP23AO75900 390 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 RGS11O94810 467 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 RAB7AP51149 207 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 Q6ZTK2 550 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 C16orf82Q7Z2V1 217 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 C3orf56Q8N813 242 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 OR10X1Q8NGY0 326 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 RPEQ96AT9 228 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 GALMQ96C23 342 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 AJUBAQ96IF1 538 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 OR51E2Q9H255 320 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 CHMP1AQ9HD42 196 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 GNG12Q9UBI6 72 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 ETV7Q9Y603 341 aa11.34□□□□□ -0.59
SNRPA1-216ENST00000626000 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 SERPINE3A8MV23 424 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 TXNL1O43396 289 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 AIREO43918 545 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 RAG2P55895 527 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 CLDN12P56749 244 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 OR10A3P58181 314 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 HTD2P86397 168 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 AWAT1Q58HT5 328 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 LY6G6FQ5SQ64 297 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 LHFPL4Q7Z7J7 247 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 LINC00311Q8N616 119 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 OR4K15Q8NH41 348 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 MRPL30Q8TCC3 161 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 PHF21AQ96BD5 680 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 RAB3CQ96E17 227 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 SULT4A1Q9BR01 284 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 FAAP24Q9BTP7 215 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 TAF9BQ9HBM6 251 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 PSG11Q9UQ72 335 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 TCF19Q9Y242 345 aa11.33□□□□□ -0.6
SNRPA1-216ENST00000626000 SHISA3A0PJX4 238 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 NAPSAO96009 420 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 HBZP02008 142 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 SDC2P34741 201 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 VEGFCP49767 419 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 TPTE2P1Q5T6R2 138 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 OR4C13Q8NGP0 309 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 CAPSLQ8WWF8 208 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 OCSTAMPQ9BR26 566 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 NICN1Q9BSH3 213 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 GHITMQ9H3K2 345 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
SNRPA1-216ENST00000626000 DNHD1Q96M86 4753 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 A0A0A6YYH2 397 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 A6NJ64 397 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 FOXI3A8MTJ6 420 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 SOCS1O15524 211 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 DIRAS3O95661 229 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 CD3GP09693 182 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 GDNFP39905 211 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 KIR2DS4P43632 304 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 LOXL3P58215 753 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 KIR2DS1Q14954 304 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 HMGN3Q15651 99 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 LTC4SQ16873 150 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 OR10R2Q8NGX6 335 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 C17orf50Q8WW18 174 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 YIPF6Q96EC8 236 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 CMSS1Q9BQ75 279 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 MRPS26Q9BYN8 205 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 KCNK15Q9H427 330 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 C16orf95Q9H693 158 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 OR2S2Q9NQN1 319 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 C1RLQ9NZP8 487 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms