RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 FAM234AQ9H0X4 552 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 NDUFB4O95168 129 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ISG15P05161 165 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LYL1P12980 280 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 FBLP22087 321 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DUSP3P51452 185 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SRPXP78539 464 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CNKSR3Q6P9H4 555 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MRGPRGQ86SM5 289 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CLEC18AA5D8T8 446 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 NUPR1O60356 82 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CDS2O95674 445 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 KRASP01116 189 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 GFERP55789 205 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 RPL23P62829 140 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CLEC18CQ8NCF0 446 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 B3GAT1Q9P2W7 334 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 R4GN57 208 aa12.14□□□□□ -0.47
TNFRSF11A-205ENST00000616710 C11orf94C9JXX5 98 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 F6UZH7 168 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 EDDM3BP56851 147 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TRBV11-1A0A0K0K1C0 115 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 GDF9O60383 454 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SERF1AO75920 110 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 RIPPLY3P57055 190 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 Q56UQ5 140 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZBP1Q9H171 429 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LYRM2Q9NU23 88 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 RALGAPA1Q6GYQ0 2036 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TOX3O15405 576 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CA3P07451 260 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZDHHC23Q8IYP9 409 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR10G4Q8NGN3 311 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ASB10Q8WXI3 467 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 PLPPR2Q96GM1 343 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 BMFQ96LC9 184 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TRDCB7Z8K6 153 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LINC00614P0C842 121 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SCRT1Q9BWW7 348 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LHFPL6Q9Y693 200 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF253O75346 499 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ANOS1P23352 680 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 IL3RAP26951 378 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TSPAN7P41732 249 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 RANP62826 216 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 QRFPP83859 136 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 IL15RAQ13261 267 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CNN3Q15417 329 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SHHQ15465 462 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 NUFIP2Q7Z417 695 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ZNF808Q8N4W9 903 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR13H1Q8NG92 308 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 NINJ1Q92982 152 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TM4SF19Q96DZ7 209 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 PRRC2CQ9Y520 2896 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SZT2Q5T011 3432 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SCTP09683 121 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SMIM10L1P0DMW3 83 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SMIM10Q96HG1 83 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MRGPRX4Q96LA9 322 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 ALKBH4Q9NXW9 302 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
TNFRSF11A-205ENST00000616710 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 SLC17A3O00476 420 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 C1QTNF9P0C862 333 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TCN2P20062 427 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MRPS11P82912 194 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 PCNX3Q9H6A9 2034 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 LMO1P25800 156 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MRPL54Q6P161 138 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR1N1Q8NGS0 311 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 OR4C12Q96R67 309 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 TBX21Q9UL17 535 aa12.11□□□□□ -0.47
TNFRSF11A-205ENST00000616710 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms